Cucurbita moschata (crookneck pumpkin): 111457096
Help
Entry
111457096 CDS
T05248
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111457096
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
111457096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
TFIIB
Auto_anti-p27
GATA
Motif
Other DBs
NCBI-GeneID:
111457096
NCBI-ProteinID:
XP_022955013
UniProt:
A0A6J1GSR8
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSGSCKNCSGRSLFRDDVSGNLICSSCGIVQEFDNYDAQLGGLNGPQGTFVRVGTSGSGS
VLNYKDKKIYEAQNIIEDITFRLGFSASKSNDVRILVSTITEGEYGQGDWFSILVGACSY
VSMRKDNRPLPMSEVASTIECDLHELGRMVLRVVDFLDLKGPAFPGFDIVGSLERAARNS
PSFSKVEADTLDVIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSGLNEVNVSIDDV
AMEVHAKVSTCKKRYRELLGALVEVGKKLPWGKDITKRNIVKNAPFVIQYMELKSMSNTC
GRGKNFEDVGIDLQAAVSECLRKELQYESEVNNLEDDSQYFELIGNSWRDESSCDDRNKL
NISHECLSLIYTKFLDEMAHLRSSGGINEIYGRKLGRKAGFQSSTEWWEGKSQLSKKLLL
HQLLETDVGLNGMPPSFVTSCNAYKRRKEKINAAKNRIQRIMLPSNTAIGNVNAEKERKR
KRAIGIEWEDIIIETLLLHDVKEEEIEKGHYNALLDLHVFSSWRS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctcctgcaagaattgcagcggcaggtcgctcttccgcgacgatgtttccggc
aatctgatttgctcctcctgcggtattgttcaggaatttgacaactatgatgcccagctt
ggcggtctcaatggtccgcagggcacattcgtccgcgttggaacctcaggttcgggcagt
gttttgaattataaggataagaaaatctatgaggctcaaaacattattgaagatattacg
tttaggttagggttttctgcttccaaatctaacgatgttaggattttagtatcgacgatt
acagagggtgagtatggacaaggcgattggttctcaattctcgttggtgcctgttcttac
gtttctatgcgcaaggataatcgtccattgccaatgtcggaggttgcatcgaccattgag
tgtgatcttcatgaacttggcagaatggttctcagagttgtcgattttttggatttgaaa
gggcctgcgtttcccggttttgatattgtggggtcattggagcgggcggcaaggaattca
ccgtctttctcaaaagtagaagcggatacactggacgtaatagttaagcaaggaatcttt
ttgttacagtgtgctatgaaatggtttctgacgactgggcggcaaccactacccatggtg
gctgctgtgttggttctggtgtcaggactgaatgaggttaatgttagtatcgatgatgta
gccatggaggttcatgccaaggtttctacatgtaagaagaggtacagagaacttttgggg
gcacttgtagaagttggcaaaaagttgccttggggaaaagatatcaccaaaaggaatatt
gtgaagaatgctcctttcgtgatccaatatatggagttgaaatcaatgtcaaatacctgt
ggtcgggggaagaatttcgaggatgtagggatcgatttgcaggctgcagtgagtgagtgt
ttaagaaaagagctacagtatgaaagtgaggtcaataatttagaagatgattctcagtat
tttgagttaataggcaatagttggcgtgatgaatcgagttgtgatgatcgaaacaaactc
aacatttcccatgaatgtttatccttgatttatactaagtttttggatgaaatggctcat
ctcaggtcatcgggcgggattaatgaaatctatggaagaaagctgggaagaaaagctggt
tttcagtcaagtacggagtggtgggagggaaaatcacaattaagcaaaaagcttctactg
catcaattattggagactgatgtaggattgaatggtatgccgccttcatttgtaactagt
tgcaatgcatacaaaaggaggaaggagaaaataaacgctgctaagaatcgaatccagagg
atcatgcttccttcaaacactgcgattggcaatgtaaatgccgagaaggaaagaaagcgt
aagagagctatcggtatcgaatgggaagatataataatcgaaacccttcttcttcatgat
gtgaaagaggaggaaattgagaagggtcattacaatgcattgctggacttgcatgtattc
agttcttggaggtcttag
DBGET
integrated database retrieval system
