Cucurbita moschata (crookneck pumpkin): 111457233
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Entry
111457233 CDS
T05248
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111457233
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111457233
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111457233
NCBI-ProteinID:
XP_022955190
UniProt:
A0A6J1GUG9
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MAPPTLFLSLISLFLLSSLSTTLSAAPAAVQNPELVVEEVHRSIINATKRRNLGYLSCGT
GNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLR
YAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHG
LNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHG
STAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVV
NNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKHWNWRSEGDM
MVNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccaacactttttctctctctaatctctctcttcctcctttcctctctctcc
accaccctctccgccgctccggccgccgtacagaaccccgaactcgtcgttgaagaagta
cacaggagcataatcaacgcgacaaagcggaggaatttgggatatctttcatgtggaacg
ggaaatccgatcgacgattgctggcggtgcgattcaaattgggagaagaatcgccagaga
ttagccgactgtggaatcggattcggcaaaaacgccatcggcggccgtgacggtaaaatc
tacgtcgtcaccgattccggcgacgacgatcccgttaacccaaaaccgggaactctccgg
tacgccgtaatccaagacgaacccctctggatcatcttcgctcgcgatatggtaatccga
ttaaaagaggaactaatcatgaactcattcaaaaccatcgacggccgtggcgccagcgtc
cacatcgccggcggcccctgcattacaattcaatacgtaacgaacatcataatccatggc
ttgaacattcacgattgcaagcaaggaggaaacacagacgtgagagattccccaagacat
tttgggttccgaactatctccgacggcgacggcgtttcaatcttcggcggcagccatgtc
tgggtggatcactgctcgttgtccaactgtaatgatgggttgatcgatgcgattcatggg
tcgacggcgattacgatttcgaacaattacatgacgcatcatgataaagtgatgttgctt
ggacatagtgattcgtatactcaagataagaatatgcaggtcaccatagcttttaaccac
ttcggtgaagggcttgttcaacgaatgcccagatgccgacatgggtattttcacgtggtg
aacaatgactacacgcattgggaaatgtacgccattggaggaagtgctgctccgaccatt
aacagtcaaggcaacagatttgtagctcctaacgacagattcagcaaagaggtgacaaag
tatgaggatgcgcccgagagtgagtggaagcattggaattggaggtcggaaggggatatg
atggtgaacggtgcgtttttcacggcttccggcgccggagcgtcgtcgagctatgctaga
gcgtcgagcttaggggcgaggccgtcgtcgctggtcgggacaattacgaccaatgcgggt
gcactgaactgcagaaagggctcccgctgctga
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