Cucurbita moschata (crookneck pumpkin): 111457549
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Entry
111457549 CDS
T05248
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111457549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_8
PAS_3
Diguanyl_cycl_sensor
DUF1425
Motif
Other DBs
NCBI-GeneID:
111457549
NCBI-ProteinID:
XP_022955574
UniProt:
A0A6J1GWN6
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MVSSNRATHWHQQQAQSSNTNTSNFRSHRTDSINKAIAQYTADARLHAVFEQSGESGKSF
DYSQSIRTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIAIDEASFRVIAYSENARELLGL
TPQSVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYA
ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES
VRELTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRM
IVDCNASPVRVIQEPGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDDE
AIGGQNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKHVLR
TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAEIKDIVEWL
LAFHGDSTGLSTDSLGDAGYPGAALLGDAVCGMAVAYITKRDLLFWFRSHTAKEIKWGGA
KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKEDVAMTS
KAVVHPQLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGHINGWNAKIAELTGLA
AEEAMGKSLVRDLVYKESEETVDKLVSRALKGEEDKNVEIKMKTFGPEDQRTPIFVVVNA
CSSRDYTDNIVGVCFVGQDVTCQKVFMDKFISIQGDYKAIVHSPNPLIPPIFASDDNTCC
SEWNTAMEKLTGWSKEEIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHSAIGGQDNEKYP
FSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKNRFARMK
ELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMDLECIDD
GTMELEKGEFLLGSVINAVVSQVMILLRERNLQLIRDIPEEVKTMAVYGDQMRIQQVLAD
FLLNMVRYAPSPEGWVEIRVCPFLKQNPDGHTLAHTEFRIVCPGEGLPPELVQDMFHSGR
WVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLITLELPLTERGLNDVG
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggtttccagtaatcgagcgacgcattggcatcaacaacaagcacagtcctcgaacacg
aataccagcaatttccgatctcaccgtacagattctatcaacaaagccatagcgcagtac
acagccgatgctcgtcttcacgcggtgttcgagcagtcaggtgagtctgggaaatctttt
gactactcacaatctataagaacttcgacgcaatctgtgccggagcagcaaattactgct
tatttgtcgaagattcaaagaggcggccatatccagccctttggatgtatgatagccata
gatgaggctagttttcgggttattgcatacagtgagaacgctagggaattgctcggttta
actccccaatcagtgccgagtcttgaaaagcctgagatcctcacaattgggactgatgta
cggaatttgttcacttccaacagtgcaattctgctcgagaaggcatttggggcgcgagaa
atcactttgttgaaccctgtttggattcattccaagaattctggtaagcctttttacgca
attttgcataggattgatgtgggaattgtgattgatttggagcctgcaagaacggaggat
cctgccctttctattgctggcgcagtccaatcgcaaaaacttgcggtacgtgctatttct
cagttgcaatcactccctggtggagatattaaactgttgtgtgatactgtggttgagagt
gttagggagcttactggatatgatagggttatggtgtataaatttcatgaggatgagcat
ggtgaggttgtggctgaaagcaagagggctgacttagagccatacattggattgcattat
ccttctactgatattcctcaggcatcaagatttttgtttaagcaaaaccgtgttaggatg
atcgttgattgcaatgcctctccagttcgtgtaattcaggagccagggcttatgcaacat
ctatgcttggtgggttcaactcttcgtgctccccatggctgccatgctcagtatatggcc
aatatgggctccattgcttcgttagcaatggcagttattatcaatggtaatgatgatgaa
gctattggcgggcaaaactcaacaaggctttggggtttggttgtatgccaccatacttct
gctcggtgtattccgttcccgcttcggtatgcctgtgagtttctaatgcaagcctttggg
cttcaactgaatatggaattgcagttggcttcacagatgtctgagaaacatgttttgagg
actcaaactctcttgtgtgacatgcttcttcgtgattccccaactgggattgttacacag
agtccaagcatcatggacctagtaaagtgtgatggggcagctctctactatcaagggaaa
tattaccctctgggtgttacgccaaccgaggccgaaataaaggatattgtggaatggttg
ttggctttccatggagattcaactggtttaagtacagatagcttgggtgatgctggatat
ccaggggcagccttgctaggtgatgcagtttgtggaatggctgttgcttacatcacaaaa
agggatttgctattttggttccgatcacatacagcaaaagagatcaaatggggtggcgca
aagcatcacccagaggataaggacgatggtcaaagaatgcatccacgttcatcattcaag
gcattcttggaagttgtaaaatcccgtagtttaccatgggagaatgcagaaatggatgca
attcactcattgcagcttattctgcgagactcatttaaggaagatgtggcaatgacttca
aaggcagttgtgcaccctcaactaggggatcttgacttgcaagggatcgacgagctcagc
tcagttgcaagagaaatggtcaggttaattgagactgcaactgcccctatctttgctgta
gatgccgatggtcatatcaatggatggaacgcgaagatagctgagttgactgggcttgca
gctgaggaagctatggggaaatccttagttcgtgatcttgtgtataaagaatctgaagaa
acagtcgacaaacttgtttcccgggctttaaaaggtgaagaagacaaaaatgtagagata
aaaatgaagacatttgggccggaagatcaaagaacgccaatttttgtggttgtaaatgct
tgctctagcagggactacaccgataatatagttggcgtttgttttgttggtcaagatgtt
acctgccaaaaagtgttcatggacaaatttattagcatacaaggtgattacaaagcaatc
gttcatagtccaaatcctcttatccctccaatatttgcttcagacgacaatacatgttgc
tcagaatggaataccgccatggaaaagctcactggatggtccaaagaggagataattgga
aaaatgctagtaggagaagtttttggaagttgttgtcgactgaagggtccagatgcattg
accaaatttatgattgtcttgcacagtgcaattggtgggcaggacaatgaaaaatacccc
ttttctttttatgacaaaaaggggaaatatgtgcaagctctcctaacagcaaataagagg
atgaatatggagggtcagattgttggagctttctgcttcttacagatagctagtcctgaa
ttgcagcaaactcttagaatgcagaggcaacaggagaagaaccggttcgctaggatgaaa
gagctggcttacatttgccaggaagtgaagagtcctttgagtggtatacgcttcactaac
tcacttttggaggctacagatttgagtgaagatcaaaaacagttcctcgagaccagtgtt
gcttgtgaaaagcagatgttgaagattatagaagatatggatttggaatgcattgatgat
ggtacgatggaacttgagaagggggagttcttattgggaagtgttatcaatgctgttgtt
agccaagtaatgatactcctcagagaaaggaacttacagctgatccgtgatataccagaa
gaagtaaagactatggctgtctatggcgatcaaatgaggattcaacaagtcttagctgat
ttcttgttgaatatggtccgttacgcaccctctccagaaggttgggtagaaatacgtgtc
tgtccattcctgaagcaaaatccagatggacatactcttgcacacactgaattcaggatt
gtatgccctggggaaggtctaccacctgagttggttcaggacatgtttcatagtggcaga
tgggtgactcaagaaggcttaggcttaagcatgtgcagaaagatattgaagctcatgaat
ggtgaagtccagtacatcagagagtctgaaaggtgttatttcttgatcactctcgaactc
cccttgacagagagaggcctaaacgacgtcggttag
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