KEGG   Cucurbita moschata (crookneck pumpkin): 111457567
Entry
111457567         CDS       T05248                                 
Name
(RefSeq) splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111457567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmos03041]
    111457567
Spliceosome [BR:cmos03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111457567
 Complex B
    111457567
 Complex C
   U2 SnRNP specific factors
    111457567
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 111457567
NCBI-ProteinID: XP_022955618
UniProt: A0A6J1GUH0
LinkDB
Position
Unknown
AA seq 377 aa
MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEESLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGSFGA
PVPPRPFANGAMAPSPIPAIRPPPPQGVAFPPMQMVGQPQAWQGQPQQQAQMMPGSFMLP
PVQQFRPPPPNMPPPPPQAPTHSMPVPPPMGMGTQPQIRRPPPTPMQQQLGMPPMQMSSM
PLPPPPNHIPPPLPASG
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgacgacgaagatagcgccgggagtcggagctaatcttctgggccagcacgcccccgag
aggaaccaagacgccactgcctatgtcggcaatctagatccccaggtttctgaggagtcg
ctttgggagctgtttgttcaagccggcccagttgtcaatgtgtatgtgccgaaggataga
gtcactaacttgcatcagggatatgggttcattgagtttcgcagtgaggaagatgcagat
tatgctattaaggtgctaaatatgattaagctctatgggaagccaattcgtgtaaacaaa
gcatctcaagacaagaagagtttggacgtcggtgcaaatctcttcataggaaaccttgac
ccggatgtcgatgagaagcttctctacgatactttcagtgcatttggggtcattgtgacg
aatcctaagattatgagggatcccgatacaggaaactcacgtgggttcggttttattagc
tatgactccttcgaagcatctgatgcagcaattgaggcgatgaacggccagtatctttgc
aatcgtcaaattacggtttcgtatgcctataagaaagatacgaagggagagcggcacggc
acacctgcagagagagtattggctgctagcaatccccagaagagtaggcctcacactttg
tttgccagtggccctccgacacttcccaaggttgcacagcctaatggttcgtttggagct
ccagtgccaccacgccccttcgcaaatggcgcaatggctcccagtccgattcctgcaata
cgtcctccaccaccgcaaggggtggctttcccccctatgcagatggttggacaaccacaa
gcctggcagggtcaaccgcagcaacaggctcaaatgatgcctggttccttcatgctgcca
ccagttcagcagttccggccacctccaccaaacatgcctcctccacctcctcaagctcca
acacattccatgcccgtccctccaccaatgggtatgggaacacagccacagattaggcga
ccaccgccaacaccgatgcagcagcagctcggaatgccaccgatgcaaatgtcgtcaatg
cccctcccgccacctcctaatcacattccgccgcctcttccagcttcaggctga

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