Cucurbita moschata (crookneck pumpkin): 111457654
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Entry
111457654 CDS
T05248
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111457654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111457654
Spliceosome [BR:
cmos03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111457654
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
111457654
NCBI-ProteinID:
XP_022955756
UniProt:
A0A6J1GUQ9
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All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MEIKTCGKAIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADTKTLWNWFEPYVK
DEEEFSPESHGRMTTMGAYVRDLLLGQYYFDTLFPRIPVSVLRQVAANLEKLKLPSKHSG
VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRCTLPPSVSDRDNRDD
LQRSPSSRHPDNGERSRDRDHDRERSSDRDHGRKRSRDRDHNRDSRRKDRDRDRDRDRER
YRNRERDRDRDGEREKGRGRDMERERDRDRDRERSYDYDRRTHYADSRRDYKRSSRDSVA
QHYQRSFSRSRSRSRSQSLQTGNDGYHKREASPVRGGTTEKTSMNLAKLKDIYGDVREEK
GDLSKERFDNRRDSSGEEVIRLGGSWK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggagattaagacttgtggcaaggcaattgattctttgctggagaaggttttatgtatg
aacattctttcttctgattactttaaggagctttatcgtttgaagacataccatgaagtg
gtcgatgaaatttataaccaagttgatcatgtggagccatggatgactgggaactgccgt
ggtccttcaacagcattctgccttctgtacaagtttttcaccatgaaacttactgtgaag
caaatgcatgggctattaaagcacgaggattctccttacatcagagcgattggattcctc
tacttgagatatgttgcagatacgaaaactctgtggaattggtttgaaccttatgttaaa
gatgaagaggaattttcaccagaatcccatggacgaatgactacaatgggtgcttatgtg
cgtgatttgctccttggacagtattacttcgatacccttttccctcgtattccagtttct
gtcttgcggcaagttgcagctaatctcgaaaagttgaagcttcccagcaaacattctggt
gtgacaggggaaacccatcgaatagggtctgaagataccgcacggcggccaccttctgta
aaagcgtcgctttcagtttcctttggacaacgagccccacatcgtgcctcaactagggac
tcatccccagttcgttgtacactaccaccatcagttagtgacagagataacagggatgat
ctacaaagatctccaagcagtcgccatcctgataacggggagaggagcagggatagagat
catgacagggagaggagctcggatagagatcacggtaggaagaggagcagggatagagat
cacaacagggatagtaggagaaaggatagggacagagatcgtgatcgagacagagagagg
tatagaaatcgggagagggatcgagatagagatggagaaagagagaaaggtaggggtaga
gatatggagagggagcgagacagagacagagacagagaacgaagttatgattatgatcgg
aggactcattatgctgatagtagaagggactacaaaaggagtagtcgtgatagtgtcgcc
cagcattaccaaaggagttttagccgaagtaggagcaggagcagaagtcaaagtttacaa
acagggaatgatggctaccacaagcgagaggcaagccctgtaagaggtgggactacagag
aagacgtctatgaacctggcaaaactcaaagatatttatggcgatgtgagggaggagaaa
ggggatttgagcaaagaaaggtttgataatagaagggatagcagtggtgaagaggtgatt
agattgggaggttcctggaaatag
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