Cucurbita moschata (crookneck pumpkin): 111457827
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Entry
111457827 CDS
T05248
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmos01009
]
111457827
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111457827
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111457827
Protein phosphatases and associated proteins [BR:
cmos01009
]
HAD phosphatases
Fcp/Scp phosphatases
111457827
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111457827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
111457827
NCBI-ProteinID:
XP_022955995
UniProt:
A0A6J1GWL9
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAKNQTILIKDTVYKLQLALLDGIHNENQLFAAGSLMSRSDYEDVVTERSIANLCGYPLC
QSNLPSDNTRKGRYRISLKEHKVYDLEETYKYCSSTCLINSRAFSGRLQDERCSVMNPGK
LKEILRLFENLSLDSKENTRNSCDLGLEIQEKIESSIGEVPIEEWMGPSNAIEGYVPHRN
HNIMTSPRKDGKELKDGSKAKIKQLGVGKDFFSDFSFATTVITDEEYSVSKISSGLKEMT
FDTKSKAQTGEFCGKQSNEQFTILETPHGPAPTKNSVGRKARGSKERTNVSATAESNNNL
SDAPSTSNHCSTNCNITTEEPNGGSNDLNETQIKSSLKQPGKKNLRRSVTWADAKTDETS
IINLPEDREMGKTKECSRMTSNLVNADNGNEDILRVESAEACAMALSQAAEAITSGKNEV
SDAVSEAGIIILPRPSDANEEASTNGENISEPHSSSEKSNKPGILRSDLFDPNDSWYDSP
PEGFSLTLSSFATMWMAIFAWMTSSSLAYIYGKDEKFHEEFQYIDGREYPRKIVSADGRS
SEIKQTLAGCLTRSIPGLASELKLSTPISSLEHGMGCLLDTMTFLDALPAFRTKQWQVIV
LLFIEALSVCRIPSLDSQVSHSRSLFHKVLDRAQIRSDEYETLKDHILPLGRTAQFPGEN
DA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatcagactattttgatcaaagacacagtctataaattgcagcttgcactc
cttgacggaattcataatgagaaccagctatttgcagctggatctctgatgtctcgcagt
gactatgaagacgtggtgactgagcggtctattgcaaacctctgtggatatccattatgc
caatctaatttgccatctgataacactaggaaaggccggtacagaatttccttaaaagag
cataaggtgtatgatttagaagagacatataagtactgctcttccacttgtctcattaac
agtcgtgccttttctgggagattgcaagatgagagatgttcggttatgaatcccgggaaa
cttaaagaaattcttagattgtttgagaatttgagtttggattctaaggaaaatacgagg
aacagttgtgatttggggcttgaaattcaggagaagatagaaagcagtataggagaagtt
cccattgaagagtggatgggtccatcaaatgcaattgaaggctatgttccacacagaaat
cataacatcatgacttcgcccagaaaggatggaaaagaactcaaggatggttctaaagct
aaaattaagcaattgggtgttggaaaggatttcttcagtgacttctctttcgcaactact
gtaatcacagatgaagagtatagtgtttcgaagatatcatctggtttgaaagagatgact
tttgatacaaagtcaaaagcacaaacaggagagttctgtggtaaacaatcaaatgaacaa
tttaccattttggaaaccccgcatggtccagctcccacaaaaaacagtgttggacggaag
gcaagaggatcaaaagaaaggactaatgtatcagccaccgcagaaagtaataataatttg
tctgatgctccctcaacttcaaatcactgcagtactaattgcaatataacgactgaagaa
ccaaacggtggatccaatgatcttaacgaaactcagatcaagtcctcccttaaacaacca
ggcaagaaaaacctgcgccgctctgtaacctgggcagatgcaaaaactgatgagaccagt
attataaaccttccagaggacagagaaatggggaagacaaaggaatgttccagaatgaca
agcaatttggtaaatgctgacaatggtaatgaggacatattacgcgttgaatctgctgaa
gcctgtgcaatggcactgagccaagcagctgaagcaattacttctgggaaaaatgaggtc
tctgatgcagtgtctgaagctggaattattatattgccacgtccaagtgatgctaatgaa
gaagcatctacaaatggcgagaacatatctgaaccacattcatcctcagagaagtcaaac
aaacctggaatattacgttctgatctgtttgatcccaatgactcttggtatgattcgcct
ccagagggtttcagcctaactttatcttcttttgcaaccatgtggatggcaatctttgca
tggatgacatcatcttccctggcctacatttatggaaaagatgaaaagttccacgaggaa
tttcaatatattgatgggagggagtatccgaggaaaattgtttctgctgatggccgatct
tctgaaatcaagcaaacacttgccggatgtctaacacggtcaatacctggacttgcctct
gaacttaagctatcaaccccaatatcaagtttggagcatgggatggggtgtttgttagac
actatgactttccttgatgcacttccagcattcagaacgaagcagtggcaagtaattgtt
ctcctgtttatagaagctctatctgtttgccggattccgtcacttgactcccaagtgtca
catagtagaagtctgtttcacaaggtgcttgatcgtgctcagatacggtccgacgaatac
gagactttgaaagatcatatactaccgcttggtcgaacagctcagtttccaggcgagaat
gatgcttaa
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