Cucurbita moschata (crookneck pumpkin): 111457937
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Entry
111457937 CDS
T05248
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111457937
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmos01002
]
111457937
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111457937
03036 Chromosome and associated proteins [BR:
cmos03036
]
111457937
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111457937
Peptidases and inhibitors [BR:
cmos01002
]
Metallo peptidases
Family M67
111457937
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111457937
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111457937
BRISC complex
111457937
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
111457937
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
111457937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
111457937
NCBI-ProteinID:
XP_022956156
UniProt:
A0A6J1GVS8
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSENGSVTALIWGASPQTRSDRR
KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHQSRPISLSPVYRNSVIDVESSLSSS
DNLSANVGYGPRESPEQDTGDSMIAGTLKGTGRSSELGYFFANADTNYQGKGKIGGSYLT
KNANSGITDIDPMDLSESMQEAMHRSNIEMSAAAFSRKEIPLHVMPTASLIKLDSPLMSF
TDLQQVLFEEERSAYNQAVLYNMKDGKVHPLTFIHHTSTYQASMCKLIEYCVSPVISALQ
DRAKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVHGSRASASTNPRDLYPSTASVG
ARSAGSSIHQSRKGL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgggcgttaagatgtccgaagatgtctggtttacttgcctcactcatgca
ttgtccacggagactgaagaaatcatgggacttctccttggcgatattgagcattcagaa
aatggtagtgtaactgcactaatttggggagcatcgcctcagacgcggtctgacagaagg
aaggaccgcgtggagactcatcctgaacaattggctgctgcatctgcccaggctgagaga
atgacagcaatgactgggagaacaacaagagttattgggtggtaccattcacatcctcat
attacagtgcttccttcacatgttgatgttcgaactcaggggacatatcagctccttgat
tctgggtttattgggctgatattttcctgctttagtgaagatgcaaataaggttggaaga
attcaagttattgcttttcagtcctcggatgggaagcaaaatcaccaatcaagacctatt
tctttgtctcctgtatatcgaaattcagtgattgatgttgaatcttcattgagttcctct
gataacttatcagcaaatgtgggctatggaccaagggagagtcctgaacaggatactggt
gattcaatgattgctggaactcttaagggaactggacgatcttcggagttgggttatttc
tttgctaatgctgacaccaactatcaaggaaaagggaaaatcggaggaagctatcttact
aagaatgcaaacagcggaattactgatattgatccaatggacttgtctgaaagtatgcaa
gaagcaatgcaccgctcaaatattgaaatgagtgctgccgcattctcaaggaaggagatt
cctcttcatgttatgccaactgcctcgctcataaagcttgattcaccattaatgtctttt
acagatttacagcaggttctgtttgaagaggagagatcagcttataaccaagccgtcttg
tataatatgaaggatgggaaagtgcatccgctgacattcatacatcacacatcaacatat
caggcttcaatgtgcaagttgattgaatattgtgttagtcctgtcataagtgcacttcag
gaccgtgcaaaagagaatgaaattcggttagctttgctggctgaggaagccaggaatttg
gaagttgaggctgcaaaagcaaacgagtcagtcccaggatcacctcaccaagttcatgga
tctcgagcaagtgcttcgacaaatcccagggacttatatccttcaactgcatctgttggt
gcacgaagtgcaggaagctccattcaccagagtagaaaggggttgtga
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