Cucurbita moschata (crookneck pumpkin): 111458013
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Entry
111458013 CDS
T05248
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111458013
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111458013
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Ntox14
Motif
Other DBs
NCBI-GeneID:
111458013
NCBI-ProteinID:
XP_022956261
UniProt:
A0A6J1GW27
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MDSNFKNMCLNFATMIKKLLLQIGFLVVLVLVICLIFGLKTLHHHPQGNNDPKGNDGSPN
VEYKSIDVVHYGAAGDGKTDDSQAFLKAWMAVCKAATPSAMLVPSSKTFLLNPVKFEGPC
MSSNVGVKILGKVVPPSDVDDWKEFKVKNWLWFANVSGLDIHGNGQIDGQGAGWWNRKSN
GRPTALAVYDCENLRLSGLTHINSPKSHMHIVRCNHASISQLNILAPEDSPNTDGIDVAY
STEVKIQNCSIATGDDCIAISEGSSNIHIANIECGPGHGISIGSLGEDGATSAVEEVRVQ
DCHLKGTMYGARIKTWQGGSGYARKISFRGITLDQVRNPIIINQYYCNGKKDCKNETSAV
EVSDVLYQGLRGTSATKVAVKLSCSESIGCKNLAFEDIDIKSTDSDKTTQSSCSNAHGTS
TNTVPTIDCLLP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggattctaatttcaagaacatgtgcttgaatttcgccacaatgattaagaaattgctg
ttgcagataggttttttggtggtgttagtactcgtgatttgcttgatatttggattaaaa
actcttcaccatcatccacaaggcaataatgatccaaaaggcaacgatggtagtcctaat
gtagagtataagagcatcgatgtggttcattatggggcagctggggatggaaaaacagat
gattcacaagcatttttgaaggcttggatggctgtttgtaaggctgcaacgccctcagct
atgttggtgccatcttccaagacattcttgttgaatccagtgaagtttgaaggcccatgc
atgtcctccaatgtcggggttaaaatccttggaaaggttgtgcctccaagtgatgttgat
gattggaaagagtttaaggtgaagaattggttgtggtttgccaatgtgagcggtcttgat
atacatgggaatggccaaattgatgggcagggagctggttggtggaatcgaaaatcaaat
ggacgacccacggcattggctgtttacgattgtgagaatcttcgtctttctggattaacg
catattaatagtcctaaaagtcatatgcatattgttcgttgcaatcatgcttccatctct
caattgaacatcttagcacccgaggatagtcccaatactgatggtattgatgttgcctat
tcaaccgaggttaagattcagaattgcagtattgcaacaggtgatgattgtattgctatt
agtgaaggctcttccaatatccacatagcaaacatcgagtgtggacctggtcatggcata
agtattggtagcttgggagaagacggggcgacatccgccgtagaagaagtgagagttcaa
gattgtcatctgaaaggaactatgtatggagcaaggatcaaaacatggcagggaggatca
ggatacgcaagaaagatatcgtttcgaggaatcacactcgatcaagttcgcaacccaatc
ataatcaaccagtattactgcaacggaaaaaaagactgcaaaaacgagacatcagctgta
gaagtgagtgatgtgttgtaccaaggattgcgtggaacatctgcaacgaaggtggcagtg
aaattgagttgcagtgagagtataggctgcaagaaccttgcatttgaagatatcgatatc
aaatctacagattctgataaaaccactcagtcctcatgttctaatgcccatggaacatca
acaaataccgttcctactatcgattgtttgttaccatag
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