Cucurbita moschata (crookneck pumpkin): 111458162
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Entry
111458162 CDS
T05248
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111458162
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111458162
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Paralog
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Motif
Pfam:
Pectate_lyase_4
bpX5
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111458162
NCBI-ProteinID:
XP_022956421
UniProt:
A0A6J1GWH9
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MFLFLFQKPDLFRRLIPQYSPARNILKFLALPSRMFLVLTILLLWMSGSIFCVASAASFN
LTLPHQHPDPDSVADELQRTVNASVRRRQMLSESKDQTSSCLTGNPIDDCWRCDPNWAAN
RQRLADCGIGFGRDAMGGKGGKIYIVTDSSDSDPTNPTPGTLRHAVIQFEPVWIIFSADM
NIKLKYELIINNFKTIDGRGANVHITGGGCITIHSVSNIIIHNIHVHHCKPSGNANIRST
PSHVGHWGLSDGDGISIFSSRKIWIDHCSLSYCKDGLIDATMGSTGITISNSYFSHHDKV
MLLGHDDKYAQDSGMQVTIAFNHFGEALSQRMPRCRYGYIHVVNNDFTAWEMYAIGGSAR
PTINSQGNRYTAPVDPNAKEVTKRLDTAETEWAAWNWRSEGDILVNGAFFVPSGAGLSTQ
YGKASSVEPKSVALINQLTMNAGVFGAPRYNVGQGIVYPGFNGSNHGDGDGDGGNTAISN
SPIYGNGGGSNDEYYGMVFKGNGYRASSLSSSSTNLCIQIIIVLYIVTNYSGLLTL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttttattcctgtttcagaaaccagatttgttccgtcgattaataccgcagtacagc
cccgccagaaacatcctcaaattcctcgctctaccttcgaggatgtttcttgttcttacc
attctcttgttatggatgtctggttctatcttttgtgtcgcttctgctgcttctttcaat
cttacattaccccatcagcatcctgaccctgactctgttgctgatgaacttcaaaggaca
gtcaatgcatctgtacggagaagacaaatgctgtccgaatcgaaggatcaaacttcctct
tgcctcaccggcaaccccatcgacgattgctggcggtgcgacccaaattgggcggcgaac
cggcagcgactagccgactgcggcatcgggttcggccgcgacgccatgggtggcaaaggc
ggaaaaatctacatcgttaccgactcgtcggattcggatccgacgaaccccactccggga
actctccgccacgctgtgatccaattcgaacccgtgtggatcatcttctcagccgacatg
aacatcaagctcaaatacgaacttatcatcaacaacttcaaaaccatcgacggccgtggc
gccaacgtccacatcaccggcggcggatgcatcaccatccattccgtgtccaatatcatc
atccacaacatccacgtgcaccactgcaaaccctccggcaatgccaacataaggtcgacc
ccgagccatgtggggcattgggggctgtcggacggagatgggatatcgatattcagctcg
aggaagatttggatcgaccattgctcgctttcatattgcaaagatgggctaatagatgca
acaatgggatcgacggggataacaatatcaaacagctacttctcgcaccatgacaaggtg
atgctgttggggcacgacgacaagtacgcgcaggactcagggatgcaagtcaccatagcg
ttcaaccacttcggcgaggcgctgagccaacgcatgccgcgttgtaggtatggctacatt
catgtcgtcaacaatgacttcaccgcttgggaaatgtatgccattggcggcagtgcccga
ccaaccattaacagtcagggtaaccgttacaccgcgccggtggaccctaatgccaaagag
gtgacgaaacgtttagacacggcggagacggagtgggcggcgtggaattggcggtcggag
ggtgatattttggtgaacggcgcgttttttgtgccgtccggtgccggacttagcacccag
tacggtaaggcctccagcgtcgagcctaagtcggtggctctcatcaatcagctcactatg
aacgccggcgttttcggcgcccccaggtataatgttggtcaaggaattgtatatccaggg
ttcaacggtagcaaccatggcgatggcgatggcgatggcggaaacactgccataagtaac
agtccaatatatggaaatggcggtggtagcaatgatgaatactacggaatggtatttaaa
ggtaacggatatagagcatcatcactgtcgtcgtcatcgacaaacttatgtatccaaatt
ataatagttttgtatatagtcacaaattatagtggtctattaacattatag
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