Cucurbita moschata (crookneck pumpkin): 111458180
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Entry
111458180 CDS
T05248
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111458180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111458180
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
111458180
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111458180
mRNA degradation factors
5'-3' decay
Decapping complex
111458180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
111458180
NCBI-ProteinID:
XP_022956451
UniProt:
A0A6J1GWL4
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MAGIHQPANASVKNGLPPQELLDDLCSRFVLNVPREDLQSFERILFLVEYAHWFYEDNSV
ENNPSLKSFNLKEFTSLLFNSCDVLKPYVPHIDDIFKDFTSYKLRVPVTGGIILDETFER
CLLVKGWKGSSWSFPRGKKSKDEEDHACAIREVLEETGFDVTPFLIEDDFLEVMFGQQRV
RLYIIAGVKTDIPFAPLTKKEISEIAWHRLDDLLPASDDVISHGITGLKLYMVAPFLNSL
RSWILNHQPPVNPNFDMHVKGVTMWKVKNSSIVFDSQQTKFDSDPGQSLRNFKFDTASIL
QAMESAFAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccggtattcatcagcccgctaatgcgtcggtgaagaacggtcttcctccccaggag
ctccttgatgatctttgcagccgatttgttttaaatgtgccaagggaagatctacaatca
tttgagaggattctgtttctagttgaatatgcacattggttctatgaggacaactcggta
gagaataacccttcactgaagtccttcaacttgaaggagttcacttcgttgctatttaac
agttgcgacgttttgaaaccatatgtgccccacatagatgacatatttaaggacttcact
tcctataagcttcgagttcctgtcactgggggaattattttggatgaaacctttgagagg
tgcttactggtgaagggatggaaagggtcaagctggagttttcctcgtggaaaaaagagc
aaggatgaagaagatcatgcttgtgccattagagaagttttggaggaaactggttttgac
gtgacaccgttcctcatcgaagatgattttcttgaagtgatgtttggacaacagagagtg
cggctttacattatagctggggtgaaaactgatatcccctttgcacctctaacgaagaaa
gagatcagtgaaattgcatggcatcgacttgacgaccttctacccgcaagtgacgatgtg
atatctcatggaatcaccggcctcaagctttacatggtggctcctttcttgaactcgttg
agatcatggatcttgaatcatcagccgcctgtgaatcctaacttcgacatgcatgtaaaa
ggagtcaccatgtggaaggtgaagaacagctcgatcgttttcgacagccagcaaacaaaa
tttgattctgatcctggacaaagcctcagaaacttcaaattcgatacagcctctatcttg
caggctatggaaagtgcttttgctgcttga
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