Cucurbita moschata (crookneck pumpkin): 111458469
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Entry
111458469 CDS
T05248
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420
Nucleotide excision repair
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111458469
09124 Replication and repair
03420 Nucleotide excision repair
111458469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cmos03051
]
111458469
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111458469
Proteasome [BR:
cmos03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111458469
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111458469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_RAD5A
CUE
Dsc3_N
Rad60-SLD_2
NQRA_N
TECR_N
Motif
Other DBs
NCBI-GeneID:
111458469
NCBI-ProteinID:
XP_022956931
UniProt:
A0A6J1GXU6
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL
LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA
QPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV
RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV
TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtcaagactctcaagggctcgcacttcgaaatcgaagttaagcctgaa
gatatggttgctgatgtgaagaagaacatagaaactgttcagggtgctgatgtttaccct
gctgctcagcagatgcttatccatcaagggaaagtccttaaagacggcacaacactggac
gaaaataaagtttccgaaaatagttttattgtaataatgttaacaaagaataaaagttca
tcgggtgcgacatcttctaccacacaagctgcgccagtatcgaaggcaccacagaacact
gcccctgcacctgctgccactccagtgtcaacgtcggaagttcctctaccaacgtcagca
ccgcctgctactgttaccgactctactcctcccgctcctccggctctggctccagctcca
gctccgtctccagctgcagttcctgcaaccactgttttggcagaatccgatgtctacagc
caagcagcttctaacctggttgctggtagtaacttggaggacactatccaacaaattctt
ctcatgggcggagggatttgggacagagacactgttgttcgagctcttcgtgctgcttac
aataatccagaaagggctgttgattacctttattctggaatacctgaacaacttgaaacc
ccacctgctgctggagttccgtctactgtgcaagcgaccaacccttcagcccaacctgca
cagccagcccaacctgcacagccagcccagcctgcatctgtgacgtcaactggcccaaat
gctaatccattagatctctttcctcagggtttgcctaatatatcttccggagctgttggt
tccggcagtcttgattttctacgaaatagtcctcagttccaagctttgcgagcaatggtg
cgagctaatcctcagatactccagcctatgcttcaagagttgggtaaacaaaatcctcag
ttgattaggcttattcaagatcatcaacctgacttcctccgcttgattaatgagcccctt
gaaggagaagggaatatacttgggcagcttgctgaggctatgccgcaggctataactgta
accccggaggagcgtgaagccattcaacggcttgaggatttgggcttcgacagagctcta
gtagtggaggttttcttcgcctgcaacaagaacgaggaaatggctgccaactatctttta
gatcatattcacgaatttgagggtaatcagaattag
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