KEGG   Cucurbita moschata (crookneck pumpkin): 111458469
Entry
111458469         CDS       T05248                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like
  KO
K10839  UV excision repair protein RAD23
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420  Nucleotide excision repair
cmos04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111458469
  09124 Replication and repair
   03420 Nucleotide excision repair
    111458469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cmos03051]
    111458469
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111458469
Proteasome [BR:cmos03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    111458469
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      111458469
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 UBA_RAD5A CUE Dsc3_N Rad60-SLD_2 NQRA_N TECR_N
Other DBs
NCBI-GeneID: 111458469
NCBI-ProteinID: XP_022956931
UniProt: A0A6J1GXU6
LinkDB
Position
Unknown
AA seq 411 aa
MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL
LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA
QPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV
RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV
TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaagatttttgtcaagactctcaagggctcgcacttcgaaatcgaagttaagcctgaa
gatatggttgctgatgtgaagaagaacatagaaactgttcagggtgctgatgtttaccct
gctgctcagcagatgcttatccatcaagggaaagtccttaaagacggcacaacactggac
gaaaataaagtttccgaaaatagttttattgtaataatgttaacaaagaataaaagttca
tcgggtgcgacatcttctaccacacaagctgcgccagtatcgaaggcaccacagaacact
gcccctgcacctgctgccactccagtgtcaacgtcggaagttcctctaccaacgtcagca
ccgcctgctactgttaccgactctactcctcccgctcctccggctctggctccagctcca
gctccgtctccagctgcagttcctgcaaccactgttttggcagaatccgatgtctacagc
caagcagcttctaacctggttgctggtagtaacttggaggacactatccaacaaattctt
ctcatgggcggagggatttgggacagagacactgttgttcgagctcttcgtgctgcttac
aataatccagaaagggctgttgattacctttattctggaatacctgaacaacttgaaacc
ccacctgctgctggagttccgtctactgtgcaagcgaccaacccttcagcccaacctgca
cagccagcccaacctgcacagccagcccagcctgcatctgtgacgtcaactggcccaaat
gctaatccattagatctctttcctcagggtttgcctaatatatcttccggagctgttggt
tccggcagtcttgattttctacgaaatagtcctcagttccaagctttgcgagcaatggtg
cgagctaatcctcagatactccagcctatgcttcaagagttgggtaaacaaaatcctcag
ttgattaggcttattcaagatcatcaacctgacttcctccgcttgattaatgagcccctt
gaaggagaagggaatatacttgggcagcttgctgaggctatgccgcaggctataactgta
accccggaggagcgtgaagccattcaacggcttgaggatttgggcttcgacagagctcta
gtagtggaggttttcttcgcctgcaacaagaacgaggaaatggctgccaactatctttta
gatcatattcacgaatttgagggtaatcagaattag

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