Cucurbita moschata (crookneck pumpkin): 111458515
Help
Entry
111458515 CDS
T05248
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111458515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111458515
Spliceosome [BR:
cmos03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111458515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
111458515
NCBI-ProteinID:
XP_022957013
UniProt:
A0A6J1GYZ9
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MDRVSEKEKSSKRSREERDRDHKHRSRDAEEKHFSKDEKHRESDHHHRRRHHRSDRDSKR
ERSHEPRDHKHRRERSYDHREDRERSRDRDSSKRERSNEPRGVREGSEGRGKLREARHEQ
SDNDHEQEGSFEPTQNSVRSNKRKERGGSEDRFDGGEKKARASEDGKDLRRIEDGNEVNG
AETDAKKERRRLADDEKDGEGNLSGRGRRERKRFEDRVEEEDNGGNAEDGKVQFGGTIDD
KGSLGNGAMVEPVSMSSASVLQNFLHHSHPLPIKVSSISTTNENKGVSITRSHEVHGKSS
TDGTSSSAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKVGGSSSASSSVVKSEE
KAKPGVLGQSPTTNNATTLSIGVASSSSTLPSAASALDGGINVLAGLTSIPHFEAVKRAQ
ELAARMGFRQDPEFAPLINLFPGNTATDVAVPQKLVKAPVLCLDALGREIDEQGNVVNIT
KPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVE
EGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKMKE
PIPEIEWWDVPLLHSGTYEDVGDGVVANEKLRKDKITIYVEHPRPIEPPAEPAPPPQPLK
LTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKE
IRAAAAEREQAHIDRNVARKLTPAERREKKERKLFDDSGSLETIVSVYKINDLSHPQARF
KVDVNARENRLSGCAVICDGISVLFVEGGSKSIKRYGKLMLRRINWADSVIEEDDEEEHE
DKPVNKCSLVWQGSVAKSSFNRFSIHECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggatagggtttccgagaaggagaaatcgagcaagcgttctcgagaagaacgcgatcga
gaccacaagcatcgaagtcgagacgccgaggaaaagcatttctctaaggatgaaaagcat
cgtgaatccgatcaccatcatcgccggcggcaccatcgatcggaccgtgattcgaagcgc
gagcgttcccatgagccgcgcgatcacaaacatcggcgggaaaggtcttatgatcatagg
gaggatagagaaagaagtagagacagggattcgtctaagagagagcggtcaaatgaaccg
agaggggtgagagagggaagtgaagggcggggcaagctgcgcgaggcgaggcacgagcaa
tcagacaatgatcatgaacaggaagggtcgttcgagccaacccagaattctgtacgctca
aacaagaggaaggagaggggaggaagtgaggataggtttgatggcggtgagaagaaggct
agggcttcggaagatggaaaggatcttagacggattgaagatgggaatgaagtgaatgga
gctgagacggatgcgaaaaaggagcggaggagattggctgacgatgagaaagatggcgaa
gggaacttgagtggtaggggaaggagggagaggaagcggtttgaggatagggtagaggaa
gaggataatggtggaaatgccgaggatgggaaagttcagtttggaggcaccattgatgat
aaagggtcactggggaatggagctatggtagaacccgtcagtatgtcatcagcaagtgtg
ctccagaattttttacaccatagtcatccccttcctatcaaggtatcttcaatttctacc
acaaatgaaaataagggagttagtattaccagatctcatgaggttcatggaaaatctagt
acagatgggacatcttcaagtgctgggaaaagtgggaatctctctcttgatgctttagct
aaagctaagaaagccttacagatgcagaaagaactggccgagaagttgaagaaaattcct
ctgatgaagaaggttggggggtcaagttctgcaagcagctcagttgtgaaatcggaggag
aaagctaaacctggtgtattggggcaatcgccaactacaaataatgctacaaccctttca
atcggggtagcatcaagttcgtcgacattaccttctgctgccagtgcacttgatggtggt
attaatgttctggctggccttacctctataccccattttgaagctgtcaaacgtgcacag
gagctcgctgctaggatgggatttcgacaggatccagagtttgctcctctcataaatttg
tttccagggaacacagcaacggacgttgctgttccacagaagctagtcaaggcccctgtt
ctttgtcttgatgcacttggcagggaaattgacgaacaaggaaatgttgtcaatataacc
aaacccagcaaccttagtactcttaaggttaacatcaacaagcaaaaaaaggatgcattt
cagattcttaaacctgaacttgatgtggatccagattcaaaccctcattttgatgagagg
atgggtataaataaaacgaaattgctgaggccgaagagaatgagtttccagtttgttgag
gaagggaaatggtctaaggaggctgaaaccataaaattgaggagtaaatttggagaggca
caagctaaagaacgaaaagagaagcaagcacaattggccaaggcaaaggctgcacctgat
ataaatccgaatttgatcgaggtatcagagagagttatcgtgaaggaaaaaatgaaagaa
ccaattcctgaaattgagtggtgggatgtcccccttttgcattccggcacatatgaggat
gtgggagatggtgttgtggccaatgaaaaattaaggaaggataagattactatatatgtg
gagcatcctcgtcctattgaacctcctgctgaaccagctcccccacctcaacccctaaag
ctaacaaagaaggagcagaaaaagcttcgtacacagcgtcgtctagcaaaggagaaagat
agacaggaaatgattagacaaggcctgatagaaccacctaaaccaaaagttaaaatgagc
aatttaatgaaagttcttggttcagaagcaacccaagatcctactaaactcgagaaggag
atacgtgctgcagctgctgagagggaacaagctcacatagatagaaatgttgcacgaaaa
cttacccctgcagagcgccgcgagaagaaagaacgcaaactttttgatgattcaggttca
cttgagacaattgtgtctgtttacaaaatcaacgatttatcacacccacaggcccggttt
aaagtcgatgttaatgctagagagaaccgtttgtctggatgtgctgtgatatgtgatggc
atcagtgtactgttcgttgaagggggaagcaagtcaatcaaaaggtatgggaagcttatg
ctcaggcgtataaattgggccgattctgtgatagaggaggacgacgaggaggaacatgaa
gacaagcctgtcaacaaatgttcattggtatggcaaggaagtgttgccaagtctagcttc
aatagattttctatccacgagtgcatgaccgaagcagctgctcggaagatttttgctgat
gctggtgtcggtcattattgggatctcgccgttaacttttctgacgatcaaatataa
DBGET
integrated database retrieval system