Cucurbita moschata (crookneck pumpkin): 111458574
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Entry
111458574 CDS
T05248
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111458574
04121 Ubiquitin system [BR:
cmos04121
]
111458574
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111458574
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111458574
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111458574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING-like
zf-C3HC4_3
Rad50_zn_hook
zf-C3H2C3
Prok-RING_4
DUF7573
Motif
Other DBs
NCBI-GeneID:
111458574
NCBI-ProteinID:
XP_022957087
UniProt:
A0A6J1GY71
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA
AMYMIGHRSNSGPNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG
GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN
HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP
DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT
NGGVPRRISFASRGRGRERGGWSRIIGNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP
HFTTEPRRRRTWSMEVNSGTISW
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgatggcggcggcgtcttcctactggtgctaccgatgcagtcgctttgttagg
gttttcaatcaagactctgttgtgtgccccgattgtaatagtgggtttatcgaacagatc
gagcatccttcgaggttggtggacgtggaatcggctccgcggaggaggtttccggctgcg
gcgatgtatatgattggccaccggtcgaattcgggaccgaatttgggatctgggattcgg
agacctcggaggaatggtggggatcgctcgccctttaatcctgtgattgttcttcggggg
ccgtctgatgggagtgaaggtggagaaagtcgtcggtttgagctttattacgatgatggc
ggtggttctggcctgagaccgctgccaccgagcatgtcggagtttttgttggggtctggg
tttgataggcttctggagcaactttctcagattgaaatgaacggtattgggcggtttgag
agccccccggcgtccaaggctgcaattgagtcaatgcccacgattgagatctgtgaaaat
catttggaaactgagtcacactgtgctgtttgcaaagaagcattcgaattggggaccgaa
gcacgggagatgccctgtaagcatatttaccattatgattgcattctaccttggctttcg
attcgaaactcttgtccagtatgtcgtcacgaattgccttcggataatcagaactctccg
gatgctgcagaaagtggtgaaaatgaggggtcggtggcctcaaatggtgaagagaatgtg
ggcttaaccatttggaggttacctggcggggggtttgcggtagggcggtttaatggaggc
aggagaggtggggagagagaactcccggttgtttacactgaggtggatggtggtttcacc
aatggtggcgtccctagaagaatatcatttgcttcaagaggcagaggaagggaaagaggc
ggatggagccgaataattggcaatatgtttgcttgcttcaggggatcaatgaggtctatg
tcatctacttcaaattccaccatcgattctagttcttcaaggagtagtagaccactccca
catttcactaccgagccaaggcgacggcgcacatggtctatggaagttaacagtgggaca
atcagctggtga
DBGET
integrated database retrieval system
