Cucurbita moschata (crookneck pumpkin): 111459136
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Entry
111459136 CDS
T05248
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111459136
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmos01002
]
111459136
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111459136
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111459136
Peptidases and inhibitors [BR:
cmos01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111459136
Ubiquitin system [BR:
cmos04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111459136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
Nitroreductase
HTH_CDT1
pP_pnuc_2
SASP
Motif
Other DBs
NCBI-GeneID:
111459136
NCBI-ProteinID:
XP_022957671
UniProt:
A0A6J1GZW0
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MTVMTPAPVDQQEDEEMLVPHSDLAENDHQPMEVVPQSETGSTVENQPVEDPPSSRFTWR
IDNFTRLNIKKLYSEIFIVGGYKWRILIFPKGNNVDHLSMYLDVADSASLPYGWSRYAQF
SLGVINQIHNKYSVRKDTQHQFNARESDWGFTSFMPLSELYDPTRGYLVNDTLIVEAEVL
VRRVVDYWTYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSA
SIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEHYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPEADRTVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKED
VKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKVICNVDEKDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLVEQIGKDIFFDLVDHDKVRSFRI
QKQTPFNLFKEEVAKEFGIPIQFQRYWLWAKRQNHTYRPNRPLTPMEEAQSVGQLREVSN
KVHNAELKLLLEVEYGLDSRPIAPPDKTKDDILLFFKLYEPEKEELRYVGRLFVKGNGKP
FEILKKLNDMAGYAPEEEIELYEEIKFEPNIMCEPIDKKFTFRASQLEDGDIICFQKSPP
VENVEQYRYPDVPSFLEYVHNRQVVHFRSIEKPKEDDFCLEMSKLYTYDDVVERLAQQLG
IDDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQG
LKTLKVAFHHATKDEVVIHTIRLPKQSTVADVINDLKTKVELSHSEAELRLLEVFYHKIY
KVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKDTTQNQMQIQNFGEP
FFLVINEGETLADIKLRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSNRFQRRDV
YGAWEQYLGLEHTDNAPKRAYTANQNRHTFEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgatgactccggctcccgtcgatcagcaagaggacgaggagatgcttgtgccg
cactcggatttggctgagaatgatcaccaacctatggaagttgttccccaatccgaaact
ggaagcacagtagagaatcagcctgtcgaggatcccccatcatcaagatttacatggaga
attgacaactttacacggctcaacataaagaagctatattctgaaatctttattgttggt
ggatataaatggcgtatacttattttcccaaaaggaaacaatgtggatcatttgtccatg
tatttggatgttgctgattctgcaagtttgccatatggatggagcagatatgctcaattc
agtctgggcgtcatcaatcaaatccacaataaatattcagtgagaaaagatacacagcat
cagttcaatgcaagggaaagtgattggggcttcacgtcatttatgccccttagtgaactg
tatgaccctaccagaggatatcttgttaatgataccctaatagttgaagctgaggtcctt
gttcgaagagtggtcgattattggacatatgattcaaagaaagaaacaggttttgttggt
cttaaaaatcagggagcaacatgttacatgaactcacttcttcaaactctttatcacatt
ccatatttccggaaggctgtgtaccatatgcctactacagaaaatgacatgccatctgca
agcatccctttagctctgcagagcttattttataagctccaatatagtgacagcagcgta
gcaacaaaagaacttactaaatcttttggatgggacacatatgattcttttatgcagcat
gatgtccaggaactgaacagggttctatctgaaaaacttgaagataaaatgaagggaact
gttgtggagggaaccatacagaaattgtttgaaggacatcatatgaattacattgaatgc
ataaatgtggactataagtcaacgagaaaggagtcgttttatgatcttcagcttgatgtc
aagggctgtcgtgatgtgtatgcttcttttgacaagtatgttgaagtagaacgtcttgag
ggtgataacaagtatcatgccgaacattatgggttgcaggatgctaagaagggtgtattg
ttcattgacttccctcctgttcttcaacttcagttgaagcgatttgagtatgacttcatg
agagacaccatggtaaagatcaacgatcgatatgaattccctcttcaactggaccttgat
cgagaaaatgggaagtatttatcacctgaagctgatagaaccgttcggaatctttacaca
ctccatagtgtcttggttcacagcggtggggtgcatggtggacattattatgccttcatc
aggcccaccctttcggagcaatggtacaaatttgatgatgagcgggttacaaaagaagat
gtaaaaagggcattagaggagcaatatggtggtgaggaagagttacctcagacaaatcct
ggattcaacaacactccttttaagttcaccaagtactcaaatgcatatatgcttgtgtat
atacgcgaaagtgacaaagacaaagtaatttgcaatgtggatgagaaggacattgctgaa
catctcagggaaaggttgaagaaagaacaagaagaaaaggaacacaagaagaaagaaaag
gcggaggcacacctttatactatcataaaggttgctagagatgaagatctagttgaacaa
attggcaaagatatattttttgatcttgttgatcatgacaaagtaaggagcttccgtatc
caaaagcaaacgccatttaaccttttcaaggaggaggtcgcaaaagaatttggtataccc
atccagtttcagcgatattggttgtgggcaaagcgtcaaaaccatacttatcgacccaac
cgaccattgacacctatggaggaagcacaatccgtcggacaattaagagaggtgtcaaat
aaggttcacaatgccgagttgaagttgttactggaggtggaatatggactggattcacgg
cctattgctccaccagacaagaccaaggatgatatcttattgttttttaagctctatgag
cctgagaaagaagagctgagatacgtgggaagactttttgtgaagggtaatgggaagcct
tttgaaatattgaagaaattgaatgacatggctggttatgctccagaagaagagatcgaa
ctttatgaggaaattaagtttgagccaaacattatgtgtgagcctattgacaagaagttc
acatttcgagcaagtcagctagaagatggagatattatttgctttcaaaaatccccacca
gttgaaaatgttgaacagtaccgatatcctgacgttccctcatttttggagtatgtgcat
aaccgtcaagttgttcattttcgatccatagagaagcctaaggaagatgatttttgtctg
gaaatgtcaaaactttatacgtatgatgatgtagtggaaagattagcccagcaacttggt
atagacgatccatcaaaaattagattaacgtcacataattgttactctcagcaacctaaa
cctcagccaatcaagtatcgtggtgtggagcatttgtctgatatgctggtccattataat
cagacgtcagatatattatactatgaagtactggacatccctcttccggagttacaaggt
ctgaaaacgcttaaagtagcattccatcatgcaactaaggatgaagttgttattcataca
ataagattgccgaaacagagcactgtagcagatgtgattaatgatcttaaaacaaaggtt
gaattatctcattcagaggcagagctcagattgcttgaagttttctatcataagatctac
aaggtgtttcctcctaacgaaaagattgagaacattaatgatcaatattggactttgcgg
gcagaagagattccagaagaagaaaaaaaccttggtccaaatgatcgcctaattcatgtt
taccatttcactaaagacaccactcagaatcagatgcaaattcagaactttggcgaacct
tttttcttagtcataaatgagggagagactttggccgacattaaattgagaatacagaag
aagttacaggttccagatgaggaatttgcgaagtggaaatttgcatttctctcactaggt
cgtccagagtacctccaagacacagacatcgtttcaaatcgttttcagagaagagatgtc
tatggtgcatgggagcaatatcttggattggagcacactgacaatgcgcccaaacgagct
tatacagcaaatcagaatcgtcatacatttgagaagccagtaaaaatctacaattag
DBGET
integrated database retrieval system
