Cucurbita moschata (crookneck pumpkin): 111459167
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Entry
111459167 CDS
T05248
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111459167
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111459167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_22
AAA_27
Motif
Other DBs
NCBI-GeneID:
111459167
NCBI-ProteinID:
XP_022957703
UniProt:
A0A6J1H107
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MEDDGGERSSYVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
VILVPPNKLAPDGMVGVSVLVDKFYVTVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLTVTFNGSSDHVSIDATSVQNLEIIEP
LHSNLWGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIILLKTSLEAL
PLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQCFAV
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDVQGK
LPSKFIQVLKHGNNIRFSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL
LAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPILESIHNDFVANSI
FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTED
SLESNSSTFMTEMKETAFVMQNVSHRSLVVVDELGRATSSSDGFAIAWSCCEYLLSLKAY
TIFSTHMDGLSELVTIYPNVKVLHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
PSSVIETARNITSRILEKEERRMEINYLQYHPIRMAYNVAQRLICLKHSSHDEDSIREAL
QNLKEGYINGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggaggcgagagatcgagctacgtgatcggtctgatcgagaacagagct
aaggaggttggagttgctgcgttcgatttgagatcagcttcacttcatctttctcaatat
atagagaccagcagctcctaccagaatacaaaaactttgctgcatttctatgatccaatg
gtgattctagttcctcccaacaagctcgcacctgatggcatggttggagtttctgttttg
gtagataaattttatgttacagtgaagaaggttgtaatggctcgtggttgctttgacgac
acaaagggtgctgttttgattaagaatctggcagccaaggagccttctgctcttggtttg
gaaacttattacaaacagtactatctctgcttggctgctgctgctgctagcattaaatgg
atagaagcagagaagggggttattgtgaccaatcactctttaacggtcacatttaatggt
tcatctgatcatgtgagcattgatgcaacgagtgttcagaatttagaaattattgagcca
cttcactccaacctttggggaacaagcaacaagaagagaagtctgttccacatgctcaag
acaactaaaactataggagggtctagacttcttcgtgccaatcttttgcagccattaaaa
gatattgaaaccattaatgcccgtctggattgcctggatgaactgatgagcaatgaacaa
ctgttctttgggctctctcaagctctccgtaaatttcctaaagagactgacagagtactt
tgccacttctgcttcaagcaaaagaaagttaccaatgaagttttgggtgctgataatgct
aaaaagagccaaagtttaatatctagcattattctgctgaaaacttctctcgaggcattg
cctttactttcaaaggtgcttaaagaagcaaagaattttcttcttgcaaacatctacaat
tctgtttgtgaaaatgaaaaatttgcaaccattagaaggaggattggggaggtcatcgat
gaggatgttcttcatgctagggttccttttattgcccgcactcagcagtgttttgcggtc
aaggctggaattgatggactgcttgatatcgctagaaggacattttgtgatactagtgaa
gcaatacataatcttgctaataaataccgagaggagtacaagctgcccaatttaaaactg
ccatttaacaatagacaagggttttacttgagcattcctcggaaagatgtacaaggcaag
cttcctagcaagtttattcaggtcttgaagcatgggaacaatatacgattctctactctg
gaacttgcttctctgaatgttagaaacaagtctgcagctggagaatgctatatacgaaca
gaaatttgcctggaaggactggtagatgccataagagaggacgtctctatgctcacactg
cttgcagaagtcttgtgtctcttagatatgatggttaattcttttgcacatacaatatct
tcgaagcctgtggatagatatactaggccaaattttacagaaagtggcccgatggcaatt
gaagctgcgagacacccaatcctagaaagtatacacaacgattttgttgctaacagtata
tttctatcggaagcatcaaacatgataattgtcatgggcccaaatatgagtggaaagagt
acctaccttcaacaaatgtgccttctagttattcttgctcagattggatgttatgttcca
gcacaattctcaaccttgagggttgttgatcgtatattcacaagaatgggcacagaagat
agtctagagtccaactccagcacattcatgacagagatgaaggaaacagcttttgtgatg
cagaatgtctcccataggagtctcgttgtcgtggatgaacttgggagggcaacatcttct
tccgatggatttgcaattgcatggagctgctgcgaatatcttttatcactgaaagcctat
accatattttccactcatatggacggcctatcagaactagtaaccatctatccaaacgta
aaagttcttcacttccatgttgatataaggaataaccgtttggatttcaagtttcaacta
aaggatggaattagacatgtaccacactatggccttctattagcagaagtggcaggactg
ccaagctcagttattgaaactgcaagaaacattacttccaggatcttggaaaaggaagaa
agacggatggagataaactacttgcagtaccatcctattagaatggcttataatgtagct
cagcggttgatttgtttgaaacattccagtcatgatgaggattcaatccgagaagcatta
caaaatcttaaagaagggtacataaatgggaggctgtga
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