Cucurbita moschata (crookneck pumpkin): 111459246
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Entry
111459246 CDS
T05248
Name
(RefSeq) protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111459246
03036 Chromosome and associated proteins [BR:
cmos03036
]
111459246
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111459246
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
111459246
SLIK complex
111459246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
DpnD_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
111459246
NCBI-ProteinID:
XP_022957817
UniProt:
A0A6J1H335
LinkDB
All DBs
Position
Unknown
AA seq
1758 aa
AA seq
DB search
MAFFRNHSNEPVSHGVLEDKGQGQVSDRTHSSAGNDEEDMSTEKDFNINIGATYHNGGQV
DDSSRFQNESAADDGIAMRVSNFQNSGRRTAVGRRWGSTFWKDCQPMIHGGSDSAQESKS
ESDVKTGEGSEDNISNEKDGGSEFEDGGQPKEVKGQRRYNDVPAEGGMLSDEYYEQDVDE
QSDSIPYGGFNHSVKSNRSQLQSVNANNNYMRGNSRVGNNEDEDDGDDGEHNDDADYEED
DEDEDDPDDVDFEPDYGVSSGPSMKKDKDWDGGEDYEEDDGSDDDLEISDDDRPNYGKKG
RGKQRSKGGRNVKSTSERKSYQLSIRQRKGKSSYEEDESSTEDSASDSVEGFKSSGKTNI
RLRKNSGRYSATTVVSGRSREVRTSSRSVRKVSYVESEESEEFDEGKKNKSQKEEVEEED
GDAIEKVLWHQPKGTAEDAIRNNRSIEPVLFSHSFDSELDWNEVEFLIKWKGQSHLHCQW
KPFSELQHLSGFKKVLNYTKKVMEEIRYRTSVSREEIEVYDVSKEMDLDLIKQNSQVERI
ISDRISKDASGDVVPEYLVKWQGLSYAEATWEKDVDISFAQDAIDEYKAREAAMSIQGKS
VDLQRKKSKVSLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTV
QSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQH
EFENKRAGRPIKFNALLTTYEVVLKDRAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEF
STKNKLLITGTPLQNNVEELWALLHFLDTDKFKNKEDFIQNYKNLSSFNETELASLHMEL
KPHILRRIIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFQDLNKGVRGNQVSLLN
IVVELKKCCNHPFLFESADHGYGGDFDSNDSSKLDRIIWSSGKLVILDKLLMRLHETKHR
VLIFSQMVRMLDILADYMSYRGFQFQRLDGSTKAEFRQQAMEHFNAPGSDDFCFLLSTRA
GGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSRSVEEDILERA
KKKMVLDHLVIQKLNAEGRLEKKEAKKGIGFDKNELSAILRFGAEELFKEDKNDEDSKKR
LQSMDIDEILERAEKVEEKEAEGEEGHELLGAFKVANFCSAEDDGSFWSRWIKPEAVSQA
EEALAPRAARNTKSYAEPVQRENSGKRKKGSGPVERVQKRRKGDISASSAPMLEGASAQV
RRWSCGNLSKRDALRFSRAVMKFGNESQISLIAGEVGGAVGAAKPEAQIELFNALIDGCR
DAVESGSTDPKGPMLDFFGVLVKANELLNRVEELQLLAKRISRYEDPIKQFRALMHLKPS
NWSKGCGWNQIDDARLLLGIHYHGFGNWEKIRLDEKLGFMKKIAPVELQHHETFLPRAPN
LRDRANALLEMELAALGKNLNSKAGRKTAKKDKENIQRVSTSRGLDRKGKPGSPKVNTKL
RDRASKPQRVENLVKEEGEMSDNEEVYEHFKEVKWMEWCEDVMSGEIKTLERLHRLQTTS
AKLPKEKVLSKIRNYLQLLGRRIDQVVLDHEEEPYKQDRMTMRLWNYVSTFSNLSGERLH
QIYSKLKQEKEVGVGPSYINGTGSALVGRDGDSTHFGALPRQFQRVRGNKNNTSFQISEP
VQKGLETGKSEAWKRRRRGDADTQYQVPCPPDRPASNGGRIPDPNSLGILGAAPTENRRF
GNERPYKIHQSSFPVRQG
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggccttttttaggaatcattcaaacgaaccagtttctcatggtgtcttggaagataaa
ggccaaggacaagttagcgatagaacccactcctctgcgggaaatgatgaggaagacatg
agtacagaaaaagactttaatatcaacataggcgcaacttatcataatggaggtcaggta
gatgattccagtaggtttcaaaatgagtcagctgcagatgatggtattgctatgagagtg
tcaaactttcaaaattctggaagaagaacggcagtgggtagaaggtggggttcaacattt
tggaaggactgtcaacctatgattcatggaggttctgattctgcgcaggagtctaagagt
gagtctgacgttaaaactggagaaggatcagaagataatatatccaatgaaaaggatggc
gggtcagaatttgaagatggcggccaaccaaaagaggttaaaggtcaaagaaggtataat
gatgtccctgcagaaggtgggatgttgtcggatgaatattacgagcaggatgtagatgag
cagagcgattccattccatacggagggtttaatcactcagtgaagtcaaataggtcacag
ttgcagtctgttaatgccaacaacaattacatgcgaggaaattctagagttgggaataat
gaagatgaagatgacggagatgatggagaacataatgatgatgctgattatgaagaggat
gatgaagatgaagatgaccctgatgatgtggactttgaacctgattatggcgtctcaagt
ggtccttcaatgaaaaaggataaagactgggatggtggtgaagattatgaggaagatgat
gggagtgatgatgatttggaaatttctgatgatgatagacccaattatggaaagaaaggt
aggggaaagcaacgcagtaagggaggacgcaatgtaaaatctaccagtgaacgcaagtcg
taccaattatctattcgacaaagaaaaggaaaatcctcgtacgaagaggatgaatcttca
actgaggattctgccagtgatagtgttgagggttttaagagttcagggaagactaacatt
cgccttcgcaagaatagtggtcgttattctgcgacgacagttgtctcaggacgaagcagg
gaggtcagaacttctagtaggtcagttcgaaaagtttcatatgttgaaagtgaagaaagt
gaagaatttgatgagggcaaaaagaacaagtcccaaaaggaggaagttgaagaggaagat
ggtgatgcaatagaaaaagttctctggcaccagccaaagggcacggctgaagatgctata
agaaataacagatcaatcgagcctgtcctgtttagtcattcatttgattctgaactggat
tggaatgaggtggaatttttaataaaatggaaaggccagtcgcatttacactgtcaatgg
aaaccgttctctgaactacaacatcttagtggttttaagaaggttttaaactatactaaa
aaggtcatggaggaaataaggtacaggacgagtgtctcccgtgaggagattgaggtctat
gatgtcagtaaggaaatggatttggatctcatcaagcaaaatagtcaggtggagagaata
atttctgaccgtatcagcaaagatgcttcaggtgatgtagtaccagagtatttggtcaag
tggcagggattgtcttatgctgaagcaacttgggagaaggatgtagatatttcatttgcg
caagatgctattgacgagtacaaggctcgtgaagctgcaatgtccatacaagggaaatct
gttgatcttcagcgtaaaaagagcaaagtgagtttaaggaaacttgatgaacagcccgag
tggctgaggggaggcaagcttcgagattatcagcttgagggtttgaattttcttgttaat
agttggagaaatgatactaatgtaattttagctgatgaaatgggtcttgggaaaactgtt
cagtctgtttccatgcttggctttctacagaatgctcaacaaattcacggaccatttctt
gtcgttgtaccactgtccaccttgtcaaactgggccaaagaatttaggaagtggctgcct
gatatgaatgttattgtctatgttggtacccgtgcaagcagagaggtttgtcagcagcat
gaatttgaaaataagagagctggcagacctataaagtttaatgcattgttgactacatat
gaagtagttctgaaggaccgtgccgttctttcaaagatcaagtggaattatttgatggtt
gatgaagctcatagattaaagaatagtgaggcacagttgtatacaaccctttcggaattt
agcacaaaaaataaactgctcattactggtactccattacagaacaatgtggaagagcta
tgggctctacttcactttcttgataccgataagttcaagaataaggaagatttcattcag
aattacaagaaccttagttcgttcaatgagactgagcttgctagtcttcacatggaactg
aagcctcacatccttcgtcgtattataaaggatgttgagaagtctttgcctccaaagatt
gagcgtattcttagggttgagatgtctccgcttcagaaacaatattacaagtggatttta
gaacgcaactttcaggacttaaacaaaggagttcgtgggaatcaggtttcacttttgaat
attgtggtggagttaaaaaaatgctgcaatcacccctttctgttcgaaagtgcagatcat
ggttatggtggggactttgactcaaatgatagcagcaagctggatcgaataatctggagc
agcgggaagctagtcatactagataagttattaatgagattgcatgaaacgaagcatcgg
gttctaattttttcacagatggttagaatgctggatattcttgctgactacatgtcatat
agaggattccaatttcagaggcttgatggaagtactaaggctgagtttcgtcagcaggct
atggaacatttcaatgcacctggtagtgatgatttttgcttccttctttcaactcgggct
ggcggcttaggtataaaccttgcaacggcagatacagttatcatatttgattcagattgg
aacccacaaaatgacttacaggcgatgagtagagcccatagaattggacaacaggaagta
gttaacatatacagatttgtgactagcagaagtgttgaggaagatatcttggagcgagca
aagaagaagatggttcttgaccatctggtgattcaaaaattaaatgcggaggggagattg
gagaagaaagaagccaaaaaaggcattggttttgataaaaatgagctatcagctatctta
agatttggggcagaggaacttttcaaggaggacaagaatgatgaagatagtaagaaaagg
ctgcaaagtatggatattgatgagattcttgaaagagccgagaaggttgaagagaaagaa
gctgaaggagaggaagggcacgaattgcttggtgctttcaaggttgctaacttctgtagt
gctgaagatgatggaagtttctggagtcgctggataaaaccagaagcagtgtctcaggct
gaagaagctctagcccctcgtgctgctaggaatacaaagagctatgctgagcctgttcag
cgtgagaatagtggtaaaagaaagaaaggatctgggcctgtggagagggttcagaaacgc
cgtaaaggtgatatttccgcttcttcagcaccaatgcttgagggtgcttctgctcaagtg
agaaggtggtcttgtgggaatttgtctaaaagagatgcattgcgtttttcccgtgcggtc
atgaaatttgggaatgagagtcaaattagcttgatagctggtgaggttggtggtgcagtt
ggagcagctaagcctgaagcgcaaattgagctgttcaatgctttaattgatggttgtaga
gacgctgttgaatcaggttcaacagaccccaagggacctatgttagatttctttggtgtg
ctagtgaaagctaatgaacttctcaaccgagtcgaagaacttcagcttctagcaaaacga
attagccgttatgaagatcctatcaaacaattccgtgccttgatgcacctgaaaccttca
aattggtcaaaaggttgtggttggaaccaaatcgatgatgcaagattacttttgggaata
cactaccatggttttggtaattgggaaaagatcaggttggatgaaaaacttggtttcatg
aaaaagattgctccagtggaacttcaacatcatgagacctttctgccacgtgctccaaat
ttgagagatcgtgctaatgcgcttctggagatggagcttgctgcactcggtaaaaatctg
aattccaaagctggtcgcaagactgcaaagaaggataaggaaaatattcaaagagtttcg
acgtcacgtggcttggatagaaaggggaaaccaggttctcccaaggttaacactaaattg
agggacagagcttctaaaccccagagagttgagaacctcgtgaaagaggagggtgaaatg
tctgacaacgaagaagtatatgagcatttcaaggaagttaaatggatggaatggtgtgaa
gatgtcatgtccggtgaaattaaaactttggaacgacttcataggttacagacaactagt
gctaaactcccaaaggaaaaggtgctttcgaaaattcgcaactatttgcagcttcttgga
cgaaggattgatcaagttgttctagatcatgaggaggaaccatataaacaagataggatg
acaatgcgattgtggaattatgtctccaccttttcgaatttatctggggagagacttcat
caaatttattcaaaactcaagcaggaaaaagaagtgggagttggtccatcctacatcaat
ggcactggatctgctcttgtgggcagggatggggactccactcattttggagccttgccg
cggcagtttcagagggtaagaggtaacaaaaataacacttccttccaaatatctgaacca
gttcagaaggggctcgaaacagggaaatctgaagcatggaaacgacgaagaagaggggat
gccgatactcaataccaagttccctgtccacccgatagacctgcgagtaatggcggtcgg
atacctgacccaaattcattggggattcttggggcagcaccaactgagaacaggaggttt
ggtaacgagcggccatacaagatccatcaaagtagttttccggtgagacaaggttga
DBGET
integrated database retrieval system
