Cucurbita moschata (crookneck pumpkin): 111459466
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Entry
111459466 CDS
T05248
Name
(RefSeq) DNA topoisomerase 6 subunit B isoform X1
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmos03032
]
111459466
Enzymes [BR:
cmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
111459466
DNA replication proteins [BR:
cmos03032
]
Prokaryotic type
DNA Topoisomerases
111459466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
111459466
NCBI-ProteinID:
XP_022958156
UniProt:
A0A6J1H1C2
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MEIGGGSESPDEPKKGKSKTPRKPKESILKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
LVENSLDSAESISELPVVEITIEEILKTKFNSMIGLVDRERVDAELYDDYETAKAREKRL
AKEARAQEIQAKNASLGKKGREPAASKGMKGRGEASFYRVTCRDNGRGMPHDDIPNMFGR
VLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKGQNYTSFCRLDIDIHRNI
PHVHVQEKRDNKDLWHGAEIQVVIEGNWTTYRSKILYYMRQMAVITPYAQFLFKFVSDTP
DKNITIRFSRRTDVMPPVPQETKHHPSAVDLLLIKRLIAETAKQSLLQFLQHEFVNLGKS
YAERLIGEMGPEFCPKMSVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGII
KELHPDMVATYSGSAQVFEGHPFIVEAGVSIGGKDVKQGLNIFRFANRIPLLFEQGADVV
TRTALKRINWSSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKSAIQQ
CCIQLKSKIVKKIQAREQQERKRNLSRYIPDATNAVYNVLKEMAHVHASKKKRHDGENAE
ILSKVSARVITNETLRDKLAQHVEQVDHEMAMEYATQSGASAESKEEIYIQSLDATDNFT
DFKSPLFVFRLVH
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagattggaggtggctctgaaagtcccgatgaacctaagaagggcaaatcaaaaaca
cccaggaagcccaaagaaagcatcctcaagcaaaaatcaccagctgagttctttgcggag
aacaagaacattgctgggtttgataatcctgggaagagcctctacactaccgtgagggag
cttgtggaaaattcccttgattctgcagagtctatatctgagcttcccgtggtagaaatt
actattgaagagatattgaaaaccaagtttaattctatgattggtctggttgatcgagaa
cgtgttgatgcggaactttatgatgattatgagacagctaaggctcgtgagaaaagatta
gcaaaagaagctcgtgctcaagaaatacaagcaaaaaatgcttcccttgggaagaaaggc
agagagcctgcagcctcaaagggtatgaaaggccgtggtgaggcttcattctaccgggtg
acttgcagagataatggaagaggaatgccacatgacgacataccaaatatgtttggccga
gtactttctggaaccaaatatggcttgaagcaaacccgtggaaagtttggtctgggtgca
aagatggcattaatttggtctaagatgagtaccggtcttcctattgagatctcatcatca
atgaagggtcaaaattacacttcattctgccgcttagatattgatatccatcggaacatt
cctcacgttcatgtccaagaaaaacgtgataacaaggatctatggcatggagctgaaatt
caagttgtaattgaaggaaattggacaacttaccggtcgaaaattttgtattacatgcgg
cagatggcagttatcacaccttacgctcaatttcttttcaaatttgtttccgatacaccc
gataaaaatatcacaattagattttctcgaagaacagatgttatgcctccagttcctcaa
gagacgaaacatcatccatctgctgttgatttactattgataaagcgccttattgcagaa
acagccaaacagagccttttacagtttctccagcatgaatttgtaaacttagggaaatca
tatgctgagcgattaattggagaaatgggcccagaattttgccccaaaatgtctgttaag
tctctgacatctcagcaaatagttcgtattcatcagttgtttcgtcaagccaaatttgac
gatcctagtggtgattgtcttagtcctgctggggagtataatcttcgtcttggaattata
aaggaactgcatcctgacatggttgctacttattcaggcagtgctcaagtttttgaagga
catccattcattgttgaagctggtgttagcattggaggcaaagatgtgaaacagggtctg
aacattttccgatttgcaaatcgtataccccttctttttgagcaaggtgcagatgttgtg
actaggactgcccttaagaggatcaattggagtagttataagatcaaccaaactcaagat
aagattggtgtgttcgtgagtattgttagtactaagatccctttcaagggaactggaaag
gagtacattggagatgacatatctgaaatagcatctgctgtcaagtctgccattcagcag
tgctgcattcagttgaaaagcaaaatagtgaagaaaatacaagcacgtgagcagcaggaa
aggaaacgaaatttgagcagatacatcccggatgcaacaaatgccgtgtataatgttttg
aaagaaatggctcacgtgcatgcatcgaagaagaaacgccatgacggtgagaatgccgaa
atactcagtaaagtatctgctcgcgtgattacaaatgagactttgagggataaacttgca
caacatgttgaacaggtggaccacgaaatggcgatggaatatgccacacaaagtggagca
agtgcggagtccaaagaagaaatatatattcagtcattggatgctacggataacttcaca
gactttaaaagccctttgtttgttttcagacttgttcattaa
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