Cucurbita moschata (crookneck pumpkin): 111459484
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Entry
111459484 CDS
T05248
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111459484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111459484
03036 Chromosome and associated proteins [BR:
cmos03036
]
111459484
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111459484
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111459484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
111459484
NCBI-ProteinID:
XP_022958180
UniProt:
A0A6J1H2Q3
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MASSSCLPVVSENFSEVHDARRYLLPFTSSRSDLDATTSEDQAASLHKRRRIASSADISS
HDHLKELKNSFPTLQSPDYYMSPSLEELSIHVLEDPDYVSQVLDFTIGRCGYGSVKFLGK
TDIRWLDLDQIVKFHRNEIIVYEDETTKPVIDQGLNKPAEVTLVLRSITASFLERQYDNV
VKKLKYISERQGARFISFDPENCKWKFSVDHFSRFGLTEDEEEDIVMDDANAGQDSAEMN
CNEISDNNENNSMDFTESVLCHSLPAHLGLDPLKMKEMRMVIFPEDEQEFEDYSESPKFQ
KSFTGRELMRSPLKDSSQRTSQKLNSPVVRKTPLALLEYKQGSLDSSPPGSILLSQPKKV
TPVKPWKAEGFKLDLTQETPITINHSRNIVDAGLFMGRSFRVGWGPNGILVHTGNLVGST
NSQNVLSSVVNVEKVAIDNVVRDENSKVCKELVEFAFDLPLNLHKEMNHEFEEEVGSSNL
KLQKVVFNRLMLSDICRGYIDIVERQLEVPGLPSSTRVVLTHQIMVWELIKVLFSERENT
GNLRNLTDDNEEDMMQDMKEASLEVDLEALPLIRRAEFSCWLQESVFPQVQYELGSLNDS
SYLEHIFLLMTGRQLDAAVQLASSRGDVRLACLLSQAGGSTVNRTDVALQLAIWKKHGMD
FSFIEEERTRLYELLAGNIYGALHHIKLDWKRFLGLLMWYHLPPDATLPVIFHSYKHLLK
NRRAPLPVPVYADEPQELALESNSKECLDLSYFLMLLHANEDPEFGCLKTMLSAFSSTDD
PLDYHMIWHQRAVLEAIGAISSNDLHSLDMAFVSQLLCLGQCHWAIYVVLHMPFRDDFPH
LQAKVIREILFQYCEIWSSQESQLEFIENLGVPRIWLHEAMAVFFSYHGNLPEALEHFIE
CRNWHRAHTIFMTSVAHRLFLSAEHSDIWKLATSMETHKSEIVNWELGAGLYISFYSLRS
SLQETDEASELDSLESRNAACGKFLGRLNESLAIWGDKLPVEARVVYSKMAEEISKLLLS
DIGEGSTRDAQLSCFDTIFTAPLREDLRSSHLQDAVSLFTCYLSEITS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcctcttgtctgccagtggtttccgagaatttcagtgaagttcatgatgca
agaaggtacctattaccctttacaagttctaggtcggatcttgatgctacgacctctgaa
gatcaagctgcttcactacacaagagaagaagaattgcctctagtgctgacatttcatct
catgatcatttgaaggagcttaaaaattcctttccaacattgcagtctcctgattactat
atgtctccaagcttagaggaactgtctatccatgtcctggaagatccggattatgttagt
caggtgttagattttacgataggacgttgtggttatggatctgtcaagtttcttgggaag
actgatatcagatggttagatttagaccaaattgtcaagtttcataggaatgaaataatt
gtgtatgaagatgaaactacaaagcctgtaattgatcaaggcctgaacaagcctgctgaa
gttactttagttctccggtcaataacagccagctttttggagaggcaatatgataatgtt
gtgaagaaattgaagtacatttccgagagacagggagctcgcttcatttcatttgatcca
gaaaattgcaaatggaagttctcagttgaccatttcagccggtttggcttgacggaagac
gaagaagaagatattgtaatggatgatgctaatgcaggacaagattctgcagaaatgaac
tgcaacgagatttctgataataatgaaaataattcaatggatttcactgaatctgtgctt
tgccattctctgcctgctcatcttgggcttgatccattaaagatgaaagaaatgagaatg
gtcatatttcctgaagatgagcaggaatttgaggattatagtgaatcccctaaatttcaa
aagtcattcacaggtagagaacttatgagatctcctcttaaggattcttctcagagaacg
agccaaaaattgaattctccagttgtcagaaagactccattagcattgcttgaatataaa
cagggtagccttgactcaagtcctccgggttctattttgctgtcccaaccaaaaaaggta
actcctgttaagccctggaaggcagaaggttttaagctggatctcacgcaagaaactcca
attactataaatcattctcgcaacatagtcgatgcaggtttgtttatgggtaggtcattt
cgcgtgggatggggtcctaatggcatcctagttcatactggaaatttggtggggagtaca
aattcacagaatgtcctatcatccgtagtaaatgtagagaaagttgccattgataatgtg
gtcagagatgaaaatagtaaagtgtgtaaagaactagttgaatttgcttttgatcttcct
ttaaatttacacaaggaaatgaatcatgaatttgaagaagaagtgggatcctccaatttg
aaacttcaaaaggttgtcttcaatcgtctaatgctttcagatatctgtaggggctatata
gatattgttgaaaggcaacttgaagttcctggattaccttcttctactcgtgtagtcttg
acacatcagataatggtctgggagttaataaaagttcttttttctgaaagggaaaatact
gggaatttgagaaatttgaccgatgataatgaggaagacatgatgcaggatatgaaagaa
gcttctctggaagttgacctggaagcactccctcttattcggagggctgaatttagctgt
tggctgcaagagagtgttttccctcaggtgcaatatgaattgggttcattaaatgattcc
agttatcttgaacatatatttcttcttatgactgggcggcagctggatgcagcagtccaa
cttgcttcatctagaggtgatgtgagacttgcttgtttgctgagtcaggctggtggatcc
actgtgaatcgcacagatgtagctctacaacttgctatttggaaaaagcatggaatggat
ttcagcttcattgaggaggaacggacaaggttatatgagttgctggcagggaatatatat
ggtgctttgcaccatattaaacttgactggaagagattcctagggctgttgatgtggtat
catctaccaccagatgccactttgcctgtaatctttcactcttataaacatcttcttaag
aatcgaagggccccactccctgttccagtttatgctgatgagccgcaagaacttgctctg
gagtctaattcgaaggaatgtcttgacctctcatactttctcatgcttcttcatgctaat
gaagatcctgaatttggttgtcttaagactatgttaagtgccttctcatcaacagatgac
ccactcgattatcacatgatttggcatcaacgtgcagtgttggaagctattggtgcaatc
agttctaatgatttgcatagtctggatatggcattcgtctctcaattgttgtgtttggga
caatgtcattgggccatctatgtggtccttcacatgcctttccgtgatgattttccacac
ctccaggctaaagttatcagggaaatcctattccagtactgtgaaatatggagttcacaa
gaatcacaattagaatttattgagaacttgggtgttccaagaatatggctacacgaggct
atggcagtttttttcagttaccatggaaatcttccagaggcccttgaacatttcattgaa
tgtagaaattggcatagagctcatactatttttatgacttcagttgctcacagattattc
ctgtcggctgagcactcggatatatggaagcttgctacttcaatggagacccacaagtct
gaaatagtaaattgggaactcggagctggactttatatatcgttctattcactacgaagt
tctttgcaggaaaccgatgaagcgagcgaattggactcgcttgaaagccgaaatgctgct
tgtgggaaatttcttggtcgattaaatgaatcattggcaatttggggtgacaaattacca
gttgaggcaagagttgtgtactcaaagatggccgaggagatcagtaaattacttttatca
gatattggggagggttctacgcgtgatgctcagttaagctgctttgacactatttttact
gccccattgcgagaagacctgcgctcaagtcacttgcaggatgcagtttctctttttact
tgttacctgtctgaaatcacatcatag
DBGET
integrated database retrieval system
