Cucurbita moschata (crookneck pumpkin): 111459600
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Entry
111459600 CDS
T05248
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111459600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111459600
03036 Chromosome and associated proteins [BR:
cmos03036
]
111459600
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111459600
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111459600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
111459600
NCBI-ProteinID:
XP_022958352
UniProt:
A0A6J1H1L4
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MFGSPNPFGQPSSSPFGSQPVFGQTANASSNPFAPKPFGSTSPFGSQAGNSVFGGTATGV
FGAAQSSSPFASSTTTFGGSSSPAFGAPTFGSSSTPAFGSSSSSSFGGSSIFGQKPLFGG
FGSTPAQTNPFGSTNQQSQPAFGSTSQQSQPAFGSNVFGSSPFGAPSQPAFGATNSPAFG
TTSTPAFGATSSTPAFGTTSTPAFGATSTPAFGATSTPAFGAASAPAFGATSTPAFGSTS
TPAFGSTGSSFGSLSTPVFGSGGGFGASSTPTFGVSSTPAFGASSTPAFGASSSPSFSFG
STPAFGQSTSAFGSSTFGTNASPFGAQSSPFGAQSTTTFGTSGFGQAGFGGQRGGSRVTP
YAPTTEPDSGSGSTQAAGKLESISAMPAYKDKSHEELRWEDYQLGDKGGPLPAGQSTGGV
GFGVSTAQPNLLASSTFSQSSSNPFSTAASTNPFAPKPSGFGTFGPSTTFSFNSSAFAPS
SSSNPFASTTAASTSSSFLSSTTSQFGSSSLFGSSNAQPLASQPAFSSTTSPGTNLTFPS
SLNFSNTQSSSLFQSTAPSIGQTGSAFGAPFSQPSLFSQPSSGVGGNLFSSSPSLLTSSN
PMGFGQSSASFSMPFQQAQAQAPTSFFSNLVQTQPIGSSSFAGTSSIFGQSNFGQSPITQ
NPIVQPAPATNPFGTLPAMPQMSISRPGAAPSIQYGISSMPVVDKAAPVRISSFLTPRHL
SHRRMRLPARKYNPKNDGRPRVPFFSEDEETPSTPKADALFIPRENPRALVIRPTDQWPS
RASSERVLPSKDTSVRENGKIAEGTSSMAVNNLKDTNGNVVENGTSKDNIHPNKVNQKPN
GVHEDHSAPKEDLYRTFGGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPKMQELAAKE
RAEPGFCRHVKDFVVGRHGFGSIKFFGETDVRRLDLESIVQFNNREVIVYLDESKKPPRG
QGLNKPAEVTILNIKCFDKKTGHQYTEGPKVEKYKELLRKKTEAQGAEFVSHDPVKGEWK
FRVEHFSRYNMEDNEEVEDWE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttctcccaacccttttgggcaaccgtctagtagcccttttggatctcaacca
gtctttgggcaaactgccaacgcaagtagtaatccttttgcacctaagcccttcggcagt
acatcaccatttggctcacaggcaggaaattcagtgtttggtggtacagcaacaggtgtg
tttggggcagcccagtcttcttccccctttgcttcttcaaccacaacatttggtggttcc
tcatcgccggcttttggagctcccacttttggatcatcatcaactcctgcttttggtagt
tcatcgtcttcatcatttggaggttcctccatttttgggcagaagcccctgtttggaggc
tttggatctactcctgcccaaacaaatccatttggaagcacaaaccagcagtctcagcca
gcatttggaagcacaagccagcaatctcagccagcatttggaagcaatgtctttggttca
tcaccttttggtgcccctagtcagcctgcatttggagctactaactctcctgcctttggc
acgacaagtactcctgcctttggtgccacaagcagcaccccagcatttggcaccacgagt
acccctgcctttggtgccacaagcacgccagcctttggcgccacaagcacccctgcattt
ggcgctgccagcgccccagcctttggtgctacaagcactcctgcctttggttctacaagc
actcctgcatttggtagtactgggagttcatttggttcattaagcacccctgtttttgga
tctggaggtggatttggtgcttctagtactcctacttttggagtttctagtactcctgct
tttggggcttcaagtactcctgcttttggagcttctagcagtccatcctttagctttggg
tccactcctgcttttggccagtccacttctgcatttggtagcagcacttttggcactaat
gcatctccttttggagcgcagagttctccctttggagcacagtccactactacgtttggg
actagtggttttgggcaggcaggttttggtggacagcgtgggggcagtagagtaactcca
tatgcaccaacaactgagccagattctggaagtggcagtactcaagcagctggaaagttg
gagtctatatcagccatgcctgcttacaaagataaaagtcacgaagagttgagatgggag
gactatcaattgggagacaaaggaggacctcttcctgctggtcagtctactggtggtgtt
ggctttggtgtttctactgcacagcctaaccttctagcttcttcaacatttagtcaatca
agttcaaatcctttttctacagccgcatctaccaatccatttgcacctaaaccttctggt
tttggtacttttggaccttcaacgacattttcatttaattcttcagcatttgctccatcc
tcttcatcaaacccatttgcatcaacgaccgctgcatcaacatcatcatcttttctatca
tcaacaacctctcaatttggaagctcatccttatttggttcatctaacgctcaacccctt
gcctcacaacctgcttttagttcaactacatctcctggaacaaatcttacttttccttcc
agcttaaattttagtaatacccaatcatcttcccttttccaatccacagcaccttcaatt
gggcagactggttcagcctttggtgctcccttttcacaacccagcttgtttagtcaacct
tcgtctggggttggagggaaccttttctcaagctcgccatcactcctaacttcaagcaat
ccaatgggttttggtcaatcatctgcctctttctctatgccttttcaacaggcacaggca
caggcacccacttccttttttagcaacctggttcagactcaaccaattggttcaagtagt
tttgctggaacttcaagcatttttgggcagagtaactttggacaatcgcctatcactcaa
aaccccatcgtacaaccagcaccggccacaaatccatttgggacactccctgcaatgcca
cagatgtcaattagtagaccaggggcagcaccttctattcaatatggaatttccagcatg
ccggttgttgataaagcggctcctgtgagaatatcatccttcttgacaccccgccacctg
tctcaccgacgaatgagattgcctgcaagaaaatataatcctaagaatgatggccgccca
agggttccattcttcagtgaagatgaagagacaccaagcactccaaaggcggatgctctt
tttattccgagagagaaccctagagcattggttattcgtcccacagatcagtggccttca
agggccagttcagagagagtattgccatcgaaggatacctcagtgcgtgaaaatggtaag
attgctgaaggcacttcctccatggctgtcaacaatttgaaggataccaatggaaatgtt
gttgagaatggtactagcaaagacaacatccatcctaacaaagtaaatcaaaaacccaat
ggggttcatgaggatcactctgccccaaaggaggatttgtacaggacttttggagggcat
agagctggtgaggccgccattgtttatgaacatggggcagatattgaagcattaatgcct
aagcttcggcattcagactattatacagagccaaagatgcaagaattagctgccaaagaa
agggccgaacctgggttttgccgtcatgttaaagattttgtggtgggtcgccatggtttt
ggaagcatcaaattctttggtgaaaccgacgtgcgaaggcttgatttggagtccattgtc
cagtttaacaaccgtgaggtgatcgtctacctggacgagagtaaaaagccccctcgtggg
caaggtctgaataaacctgctgaagtaacaatactcaacatcaaatgcttcgacaagaaa
accgggcatcaatatactgaagggcctaaagttgaaaagtacaaggagttgctaaggaag
aagacggaggctcaaggcgctgagtttgtatcccacgacccagtgaaaggggaatggaag
ttcagggttgaacacttcagccggtacaacatggaagacaatgaagaagttgaagattgg
gaatga
DBGET
integrated database retrieval system
