Cucurbita moschata (crookneck pumpkin): 111460209
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Entry
111460209 CDS
T05248
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmos01009
]
111460209
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111460209
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmos04040
]
111460209
Protein phosphatases and associated proteins [BR:
cmos01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111460209
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
111460209
Ion channels [BR:
cmos04040
]
Chloride channels
Chloride channel (CLC)
111460209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
111460209
NCBI-ProteinID:
XP_022959117
UniProt:
A0A6J1H3N7
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MIQGSGEQNSLSVLQNGMDRAKSMWSRLPDTDENEDDLVSFLKKNDGGGVESLDYEVIEN
YAYWDEQAQRGRLFVGYSVVVKWLYALFIGIGTGLAAVFINMAVENFAGWKFSLTFALIQ
KSYVAGFIVYLAINLGLVFSSVYIVTHFAPAAAGSGIPEIKGYLNGIDIHGVLFFRTLIG
KIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSGKYHLNSRWLQVFKSDRDRRDLV
TCGCAAGVAAAFRAPVGGVLFALEEVTSWWKSQLLWRVFFTSAVVAVVVRAAMGWCKSGK
CGHFGSGGFIIWDISDGQEDYSFGELLPMTVIGIIGGLLGALFNQLTLYMTNWRRNHLHK
KGNRVKIIEACLISVLTSIISFGLPLLRQCTPCPKPDPDLGNECPRPPGTYGNYVNFYCS
KENEYNDLATIFFNTQDDAIRNLFSAKTMHEFSARSLLTFLVMFYTLAVVTFGTAVPAGQ
FVPGIMIGSTYGRLVGKFVVSFYKKPNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEIS
NNLKFLPLIMLVLLMSKAVGDAFNEGLYEEQAQLKGIPLLESRPKYQMRKITAKEACGKR
VVSFPRVVKVADIVSILRSNRHNGFPVIDYSRNGETRVIGLMLRSYLLGLLQSKVDFQHS
PLPSDPRGSMPTRHNFSEFVKPASSKGISIDDINLSSEDLEMYIDLLPFLNPSPYIVPED
MSLTKVYNLFRQLGLRHAFVVPRPANVVGLITRKDLLIEDSEDSDAMELQSTSVRARRRD
RRIHTANGDVESPLLNGLLVNNTDG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaggcagtggagaacagaattctttatcggtgctgcagaatgggatggataga
gcaaaaagcatgtggtctcgtcttccggacaccgatgaaaatgaggacgacctcgttagc
ttcttgaagaagaacgatgggggcggcgtcgaaagccttgattacgaggtcatcgagaat
tatgcttactgggatgaacaggcgcaaagaggaagattatttgttggctatagtgtggta
gttaagtggctgtatgctttgttcattggcattggcacaggattggctgcagttttcata
aatatggctgttgagaactttgctggctggaaattttcattgacatttgctctaattcag
aagtcatatgtggctggttttatagtatacttagccatcaacttgggtctagtgttttca
tctgtatatatagtcactcattttgctcctgcagcagctgggtctggcatacctgaaatc
aagggttatttgaatggaattgacattcatggtgtccttttcttcagaaccttaatcgga
aagatatttggaagcattggttcagtgggaggtggattggctttaggcaaagaagggccc
cttgtacatacgggcgcctgtattgcttctttgctaggacaaggtggatctggtaaatat
catctaaattccaggtggttacaagtgttcaagagtgaccgggatcgtcgtgatcttgta
acatgtgggtgtgcagcaggagttgctgcagcttttagagctccagttggtggtgtatta
tttgcactggaagaagtaacatcttggtggaagagtcaacttttgtggcgtgtgtttttt
acgtctgctgtggtggctgttgtggtgcgtgcagcgatgggatggtgtaagagtgggaag
tgtggccattttggttctggtggtttcataatatgggacatatcagatggccaagaggac
tactcttttggggagttgttgcctatgactgtgattgggattattggaggcttattagga
gcactattcaaccagcttactctttacatgacgaattggcgacggaaccatttgcacaaa
aaggggaaccgagtcaagatcattgaagcttgtctcatctcggtattaacatcaattatc
tcgttcggactaccacttctaaggcaatgtactccatgccccaaacctgatcctgatttg
ggtaatgaatgcccaaggcctccggggacgtatgggaattatgtcaatttttattgtagc
aaggaaaatgaatacaatgaccttgcaaccatcttctttaacacccaggatgatgccata
aggaatttgttcagtgcaaaaacgatgcatgaattcagtgcgcggagtttattgaccttt
ctggttatgttttatactttagctgtcgtgacgtttggtactgcggttcctgctggtcaa
tttgttcctggtataatgattggatctacgtatggacgtttggttggaaagttcgtggtt
agtttctacaaaaagccgaacattgaagagggaacatatgctttgttgggtgctgcatcg
tttctaggaggctctatgcgaatgacagtgtctttgtgtgtcatcatggttgaaatttca
aacaatttgaagtttttacctctcataatgcttgtccttctgatgtccaaggctgttggt
gatgcctttaatgaaggcctctacgaagagcaagcccagttgaagggtattccgttactg
gaatcgagaccgaagtaccagatgcggaaaataacagcaaaggaggcctgtggaaaaagg
gttgtctcgttcccccgcgttgttaaggttgctgatattgttagtattttacggagcaac
agacataatggctttcctgtgattgattactctcgaaacggagaaacacgtgtcattgga
ctaatgcttagaagttacttgttaggactactgcagtccaaagtagattttcagcacagt
cctttgccttctgatccaagaggatccatgccaaccaggcataatttcagtgagtttgtg
aaacctgcttccagtaaaggaatttctattgatgatatcaatcttagttcagaggacttg
gaaatgtacattgatctactcccctttttgaatccatctccatatattgtcccagaggat
atgtctttgacaaaggtatataatcttttccggcaattgggtctgagacacgcgtttgtt
gttccccgtccagcaaatgtggtcggtttgatcactcgaaaggatctgttgatagaggat
agtgaagattcggatgctatggagctacaatcgactagtgtaagagctcggcgtcgagat
agaagaatacatacagcgaatggggatgtcgagagcccacttcttaacggacttttggtc
aataacacagacggctga
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