Cucurbita moschata (crookneck pumpkin): 111460315
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Entry
111460315 CDS
T05248
Name
(RefSeq) chaperonin CPN60-1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111460315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111460315
03110 Chaperones and folding catalysts [BR:
cmos03110
]
111460315
03029 Mitochondrial biogenesis [BR:
cmos03029
]
111460315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111460315
Enzymes [BR:
cmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111460315
Messenger RNA biogenesis [BR:
cmos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111460315
Chaperones and folding catalysts [BR:
cmos03110
]
Heat shock proteins
HSP60 / Chaperonin
111460315
Mitochondrial biogenesis [BR:
cmos03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111460315
Exosome [BR:
cmos04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111460315
Exosomal proteins of other body fluids (saliva and urine)
111460315
Exosomal proteins of breast cancer cells
111460315
Exosomal proteins of colorectal cancer cells
111460315
Exosomal proteins of bladder cancer cells
111460315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
111460315
NCBI-ProteinID:
XP_022959286
UniProt:
A0A6J1H4F6
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MHRFATGLASKARLARNGANQIASRSNWSRNYAAKDVKFGVEARGLMLKGVEDLADAVKV
TMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCATILTKAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTMDNELEVVEGMKLDRGYISPYFITNQK
NQKCELDDPLIIIYEKKISSINAVVKVLELALKKQRPLLIVSEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKAGLQDLAVLTGGQVITEELGMNLEKVDLDMLGSCKKITISKDD
TVILDGAGDKKAIEERCEQIRSGIEASTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDDPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVELPKDEKEVPAMGGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgattcgccacaggcctcgcttccaaagcccgtcttgcaaggaacggtgccaat
cagattgctagtaggtctaactggagcagaaactatgcggcgaaagacgttaaatttggg
gtggaggctcgaggtcttatgctcaagggtgttgaggatcttgctgatgccgttaaagtt
acaatgggtccgaaggggcgcactgtagtgattgaacaaagttttggggctcccaaagtt
acaaaagatggtgtgaccgtcgccaaaagtatcgagtttaaagataaagttaaaaatgtt
ggtgccagccttgtgaagcaggttgctaacgcgaccaatgatgtagcaggcgatgggacc
acttgtgctactattctcacaaaagcaatatttacggagggctgcaagtctgttgctgct
ggaatgaatgccatggatttaagacgtggtatctccatggctgttgattcagttgtgacc
aacttgaagagtagagcacgaatgataagcacatcagaagagatagcgcaggttgggaca
atatctgcaaatggcgaaagagaaattggtgagttaattgccaaagccatggagaaagtt
ggcaaggagggcgtgatcaccatctctgatgggaagacaatggataacgagttggaagtc
gttgaagggatgaagttagacaggggatatatttccccttacttcattacaaaccagaag
aaccagaaatgtgaattggacgatcctcttattataatctatgaaaagaaaatctcaagc
ataaatgctgtggtgaaagttttggagttggctctgaagaagcaaaggccccttcttatt
gtttccgaagatgttgaaagtgaggcactagctactcttatcctgaataagcttcgtgct
ggaattaaggtctgtgccattaaagcaccaggttttggcgaaaataggaaggccggactg
caggaccttgcagttctcacgggtggtcaagtcattactgaagagcttggaatgaatctc
gagaaagtcgatctggacatgcttggctcttgcaagaagatcacaatttcaaaggatgat
acagttattcttgatggcgctggtgacaagaaggctattgaggaaagatgtgaacagata
aggtcgggtattgaagcgagcacttccgattacgacaaggaaaaattacaggagagatta
gcgaaactctctggtggtgtagctgtattgaagattggaggagcaagtgaagcagaagtg
ggcgagaagaaggatagagtcaccgatgctttgaatgccacaaaagcagctgttgaagaa
ggaatagtaccaggaggtggtgttgctcttttgtacgcatccaaagaattagataaactt
ccaactgccaactttgatcagaagattggtgtccagattattcagaatgctctgaagaca
cctgtacacacgattgcatcgaatgcgggagtcgagggagctgttgtggttggtaagctc
ttggagcaggacgaccctgatcttggttatgatgctgcaaaaggtgaatatgtagacatg
gtcaaagctggcatcatcgaccctctgaaagtaatcagaactgccctagttgacgccgca
agtgtttcctctttgatgacaacaaccgaagcgatcgtagtcgaactccctaaggacgaa
aaggaagttccagcaatgggtggtggcatgggcggaatggattactaa
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