Cucurbita moschata (crookneck pumpkin): 111460439
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Entry
111460439 CDS
T05248
Name
(RefSeq) uncharacterized protein LOC111460439 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111460439
Enzymes [BR:
cmos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
111460439
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111460439
Prokaryotic type
111460439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
111460439
NCBI-ProteinID:
XP_022959477
UniProt:
A0A6J1H4M7
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MSYWAVGSAVLPSVPRLLSPSIPSRNGDSSPTGRGFPVTISEDSSCVTEPDFPSFKWRLV
IAYDGTRYAGWQYQRSPPTIQCLVEEALTGATRLERKDLHLVGASRTDTGVHAWGQVAHF
ITPFNYDSLDRIHAALNGLLPADIRVREMSPAVPDFHARFSTLSKVYHYKIYNDAILDPF
QRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFANTAHNDRVVNPVKVIFRFDVIEMGAL
IQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDIVPKILATRDRKELAKYTTCIPPQGLC
LVRINYKEDHLKLPSDCPGTSFGRSHSVSKCKLPFY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagttactgggcggtgggttctgcggttcttccctccgttccccgtcttctttcacca
agcatcccatctcgaaatggcgattcatctcccaccggtcgtggatttccggtaacgatt
tcggaggattcttcttgtgttacagagcccgatttccccagcttcaaatggcggttggtc
attgcttatgacggcactcgatatgcaggttggcaatatcagcggtcaccacctactatt
cagtgccttgttgaagaagccttgaccggagcaacaaggcttgagaggaaggatctccat
ttagttggtgcaagcagaacagatacgggagttcatgcctggggtcaggtggctcacttt
attacaccatttaactacgacagcttggacagaattcatgctgctctgaatggtcttctt
cctgcggatataagagttcgagagatgagtcctgctgtgcctgactttcatgctcggttt
tctacattaagcaaggtttatcactacaagatatataatgacgccatcttggatccattt
cagcgttgctacacttaccactgtgtttataaactcaattatgcagccatgaaagaggct
gcaaattatttcgttggaaagcatgatttttctgcctttgctaatacagcgcataacgat
cgagtggtaaatccagtgaaggtcatttttcgttttgacgtcatagaaatgggagctctt
attcagctagaagttgagggttctgggttcctgtatagacaagttcggaatatggttgcc
ttgttgcttcaaattggaaaagaagcaattcctcctgacattgttcctaagattttggct
actcgagatcgcaaggagcttgccaagtatacgacgtgcattcctcctcagggtctctgt
cttgtgagaattaattataaagaggaccatttaaagcttccatctgattgccctgggact
agttttggcaggagtcatagtgtgagtaaatgtaagctccctttttattga
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