Cucurbita moschata (crookneck pumpkin): 111460762
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Entry
111460762 CDS
T05248
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111460762
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111460762
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111460762
NCBI-ProteinID:
XP_022959813
UniProt:
A0A6J1H707
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Position
Unknown
AA seq
457 aa
AA seq
DB search
MFATPLGCNLWYNHASTDGFIFLYNATHPILAKPTTSSSSSSSSSSSSICSPMAASFFFL
LLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPN
WETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIF
KRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGN
IRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTH
HDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG
GSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAG
AASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgaccccacttgggtgtaatctatggtacaatcacgcctctactgacggcttt
atatttctatataatgctactcatcccattttggctaaacccaccacttcttcttcttct
tcttcttcttcttcttcttcttcgatttgttctccaatggcggcttcctttttctttttg
cttctcttaccactctctttcttcttcactgattcctccttggcttctgttcaagatcct
catcttgtcgttcaagaagttcaaaggagcatcaatgaatcgaggacaagaagaaacttg
ggatatttgtcatgtagaacaggaaacccaatagacgactgctggagatgcgaccccaat
tgggaaaccaaccgaaagcgcttagccgactgcgccattgggtttggcaaaaacgccatc
ggcggcagaaacggccgcttctacgtcgtcacagacgccggcgacgacgaccctctcaac
cccagaccaggaaccctccgccacgccgtcatccaaaacgagcccttatggatcatcttc
aagcgtgacatggtaatccaactcagacaagaactagtgatgaactcgttcaagaccatc
gacgggcgtggggccagcgtgcatgtggcaggtgggccatgcatcaccatccactacgcc
acaaacatcataatccacggcatccacatacatgactgtaagagagggggcaatggtaac
atacgggactccccacagcactccgggtggtggactatatcggacggtgatggagtgtcg
atctttggtggcaagaatatttgggttgaccattgttctttgtctaactgtaatgatggg
ttgatcgacgcgattcatggttcgacggcgatcacgatttcgaataattacatgactcat
catgataaagtgatgctgttgggacatagtgactcttacactcaagacaagaatatgcaa
gttactattgccttcaaccattttggtgagggccttgttcaacgaatgcccagatgcagg
catgggtatttccatgtggtgaacaacgattacacccactgggaaatgtacgcaattgga
gggagtgcttcaccgactatatacagtcaaggcaacagatttttggcgccggacgtccga
taccgaaaggaggtgacaaagcacgaggacgcgccggagagtgagtggcgtcactggaac
tggcggtcagagggcgacatgatgttgaacggcgcctattttcgccagtccggcgccggc
gctgcgtccagctacgcaagagcttacagtctgagcgctagaccctcctccctcgttggt
tctatcacggtcacagccggcgccctcaactgccgcagaggctcccgttgctag
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