Cucurbita moschata (crookneck pumpkin): 111460882
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Entry
111460882 CDS
T05248
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111460882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111460882
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111460882
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_At1g61320_AtMIF1
F-box-like
LRR_NXF1-5
LRR_8
F-box
Motif
Other DBs
NCBI-GeneID:
111460882
NCBI-ProteinID:
XP_022959995
UniProt:
A0A6J1H7V2
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All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MLRMASTFQEDVLEHVFSFIQCHKDRNSISMVCKSWYEIERWCRKRIFVGNCYAVSPQIV
IRRFPEVRSVELKGKPHFADFSLVPDGWGGYVHPWIVAMASAYPLLEEIKLKRMVVTDES
LELISKSFKNFKVLVLMTCEGFSTDGLAAIAANCRNLKVLDLRESDVEDLSGHWLSHFPD
KYTSLVSLNIACLVSEVSISALERLVDRCPNLRTLWLNRPVPLDRHPNLLRRAPQLVEFG
AGCYTADLRSDVFSNLTTAFTSCTELKSLSGFWDVVPAYLPSVYPTCSRLTSLNLSYATI
QSDDLTKLISQCHNLQKLWVLDYIEDSGLEALADTCKDLRELRVFPSEPYGPEPNVSLTE
QGLVSVSEGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCIMEPRTPDYLTNQPLD
VGFGAIVEHCKDLQRFSLSGLLTDRCFEYIGNYGKKLEMLSVAFAGDTDLALHHVLSGCD
SLRKLEIRDCPFGDKALLANAAKLQTMRSLWMSSCLVSFGACKLLAQKFPKLNVEVIDER
GPPNIRPESCPVEKLYIYRSVAGCRLDMPGFVWTMDGDASPRLT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatggcgagtacgtttcaggaggatgtgttggagcatgtgttttcgtttata
cagtgtcataaggataggaactcgatctcgatggtgtgtaagtcgtggtatgagattgag
aggtggtgtaggaagaggatttttgttgggaactgttatgcggtgagtcctcagattgta
atcaggaggtttccggaggtgagatctgtggagttgaaggggaagccgcactttgcggat
tttagtttggtgcccgatggttggggtgggtatgttcatccttggatcgtggctatggct
tctgcgtatcctttgctggaggagatcaagttgaagcgaatggtggtgacggatgagagc
ttggagctcatttccaagtcttttaagaattttaaggttcttgtgttgatgacttgtgag
ggattcagtactgatgggcttgcggccattgctgccaattgcaggaatttgaaagtgttg
gacttacgagagagcgatgtggaagatctgagtggacattggctcagccattttcctgat
aaatatacgtcactggtatccctcaatattgcctgtttggtgtctgaggtgagtatttct
gcattggagcgtctcgtggataggtgtccaaacttacggacactgtggctcaatcgtcct
gttccccttgataggcatcccaacctacttcgtcgtgcaccacagctagttgagtttggt
gctggatgctacacagcggacttgagatctgatgttttttcgaacttaacaacagcattc
acaagctgcacagaattgaaaagtttatctggattttgggatgtggttcctgcatacctt
ccttccgtttatcccacttgctctaggttaacatccttgaacttgagctatgcaacaatt
cagagtgacgatcttaccaagcttatcagtcaatgccataatttgcagaagctttgggtg
ctggattacattgaagattctggccttgaagcccttgcagatacttgcaaggatcttcga
gaattaagagtgtttccatctgaaccatatggtccagaaccaaatgtgtctttgacagaa
cagggtcttgtctctgtttctgaaggttgcccaaagctccaatccgttctgtacttctgt
cgtcaaatgacaaatgctgccttagtgaccattgccagaaatcgaccaaacatgacacga
tttcgtctctgtattatggagccacgaactcctgattacctcacaaatcagccgcttgac
gtgggctttggtgccattgttgagcattgcaaggatctccaacgcttttccctctctggc
cttcttacagatagatgttttgagtacattgggaattatggcaagaagctagagatgcta
tctgtggcatttgctggagatactgatttagcacttcatcatgtgttgtccggatgtgat
agtcttcgcaagctggagattagggactgtcctttcggtgacaaagctcttttggcgaat
gctgcaaagctccagacaatgcgatccctttggatgtcttcttgcttggtgagttttgga
gcatgcaaattgttagctcagaagtttcccaaacttaatgtcgaagttatagacgagagg
ggtcccccaaatataaggcccgaaagttgtccggtggaaaaactttatatataccggagt
gttgctgggtgtcgcttagacatgcctggtttcgtgtggacaatggatggagatgcttct
ccaaggcttacttga
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