Cucurbita moschata (crookneck pumpkin): 111460926
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Entry
111460926 CDS
T05248
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111460926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111460926
Spliceosome [BR:
cmos03041
]
Common components
Common spliceosomal components
SR proteins
111460926
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
RRM_YTH1
F07F6_N
Motif
Other DBs
NCBI-GeneID:
111460926
NCBI-ProteinID:
XP_022960065
UniProt:
A0A6J1H6L6
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSGRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRHSSYGGSRGGRGVSRRSDYRVLVTGLPS
SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNLDDMKYAIKKLDDSEFRNAFSRA
YVRVREYDSKKDRSRSPSRGRSYSRERTCSRSRSRSRGRSRSKSRSRSKSCSRSSKSPKA
KSSQRSPVKSRSRSVSPARSRSKSPSLSGSRSRSRSPLPNREKRTSKSPNRRDASKSPSR
SRSRSKSKSPSR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgtgccagcagaacagtgtatgtcggcaatctcccgggtgatattcgtgaa
aaggaagtggaagatttattttacaagtatggtcgcatagctcacattgatctcaaggtt
ccaccaaggcctccaggttatgcatttgttgagtttgaagatgccgaagatgctcaagat
gccattcgtggtcgtgatggctatgattttgatggtcataggttgcgtgtggagcttgct
catggtggacgtggtcattcatcttccagtgatcgtcatagtagttatggaggcagccga
ggtggccgtggagtatctcggcgctctgattatcgtgtattagtcacaggattaccttct
tctgcttcatggcaagacttaaaggatcacatgcggcgagctggtgatgtttgtttctcc
caagtgttccgtgatggtagtggaaccacagggattgtggattacaccaaccttgatgac
atgaagtatgcaattaaaaaacttgatgactctgagtttcgcaatgcattttctcgtgca
tatgttcgtgtgagagaatatgattcgaagaaggatcgctccaggagtcctagtcgtggg
cggtcatattctagagagaggacttgtagtcgcagtcgcagtcgcagtagaggccgaagt
aggagcaagagccgtagtaggagcaagagctgcagtaggagcagcaagtccccaaaagct
aaatcttcccagcggtcacctgttaaatctcgatcaaggtctgtttcccctgctcgctct
cggtcaaagtcaccatctctttctggatcccgatcaagatccagatctccattgcccaat
cgtgagaaacgtactagtaaaagtcccaaccggcgtgatgctagcaaaagccctagcaga
agcagaagcaggagcaagagcaagagcccgtcccggtag
DBGET
integrated database retrieval system
