KEGG   Cucurbita moschata (crookneck pumpkin): 111461073
Entry
111461073         CDS       T05248                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111461073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmos03041]
    111461073
Spliceosome [BR:cmos03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111461073
 Complex B
    111461073
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded BUD22
Other DBs
NCBI-GeneID: 111461073
NCBI-ProteinID: XP_022960285
UniProt: A0A6J1H8M9
LinkDB
Position
Unknown
AA seq 586 aa
MTDYDGRYEGNGEDVDNYGDGFSPQARGGSHGGHDTHSDSKSQHASRDYERESSKSREKE
RDKGRDRERDRERDRDRGRERDREKSKDGARDREKDRDRDKDRDRDHDRHHRDRHRDRGD
RRERGRSRDDDDYFRSRDYDRRRDYDKDREDRHRRRSRSRSKGISEHRSRTPSPSRSRSR
SKSKRISGFDMAPPTTAILPGATAASAGQIPGTTPAIPGMFPAMFPLATGQPFGALPVMP
VQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEK
KFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVG
LTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCV
YQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLMLQP
GAVSTKVLCLTQVVSPEELINDEDYEDIMEDMRGEGEKFGTLVNVVIPRPGPNDAAPGVG
KVFLEYADIDSATKARAGLNGRKFGGNQVVAVFYPENKFAQGEYDD
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgacggattacgacggcaggtacgaaggtaatggggaagatgtagacaactatggcgat
ggtttttctcctcaagctcgtgggggcagccatggtggccatgatactcacagtgattcc
aaatctcagcatgcttctcgagactatgaaagagagagttcaaaaagtcgagaaaaagaa
agagacaaggggcgtgatcgggagagggacagggagagggatcgggaccgaggaagagaa
agggacagagagaaaagcaaggacggagcaagagatcgagaaaaggatagggatcgtgac
aaagaccgtgatagggatcatgaccgtcatcatagagaccgccatagggatcgaggtgat
aggagggaaagaggaagaagtagagatgatgatgattacttcaggagtagagactatgac
aggaggagagactatgataaagaccgagaagacagacatagacgtaggtctcgttctcgc
tcaaagggaatatctgagcatcggtcaagaactccttctccttcacgatcacgatcacgc
tccaaaagcaaaagaattagtggttttgacatggctcctccgactactgcaatattgcct
ggtgcaactgctgcttcagcaggccagattccggggacaactccagctattcctggaatg
tttcctgccatgtttccactggcaacgggccagccctttggagcacttcctgttatgccg
gttcaggcaatgacccagcaggctacaagacatgcacggcgcgtttatgttggagggcta
ccgccaacagccaatgaacagtctgttgccacatttttcagtcaggtcatggcagcaata
ggaggaaataccgctggccctggagatgcggtggtcaacgtgtacataaatcatgagaaa
aagtttgcttttgtggaaatgagatctgttgaggaagctagtaatgcaatggccttggat
ggtatcatctttgagggagcgcctgtcaaggtgcgaaggcctagtgattacaatccttca
cttgctgcaacgcttggtcccagccagccgaatcccaatctgaacctagcagctgttggt
ctaacaccaggttctgctggtggtcttgagggtccagaccgcatttttgtgggtggacta
ccctattacttcacagaagctcaggtcagggagttgctggagtcttttgggcccctgcga
ggttttgatctggtgaaagatagggaaactggaaattcaaaaggctacgcattttgtgtt
taccaagatctttcagtcacagacatagcctgtgcagccctcaatggtattaaaatgggt
gataagacgctcactgttcgacgtgctaatcaaggtaccaaccagcccaaaccagagcaa
gaaagtgttctgttacacgcacagcagcaaattgcattgcagaagctgatgctacagcca
ggggctgtatccaccaaggtcctttgtcttacacaagttgtttcccctgaagagcttatt
aacgatgaagactatgaagatatcatggaagacatgcgaggggaaggcgaaaagtttggt
acattagtgaacgtcgttatcccacgtccaggacccaatgatgcagcacctggagttgga
aaggtgtttttggagtatgcagacattgacagcgcaaccaaggctcgagctggtttgaat
ggaagaaaatttggagggaaccaagtagtggctgtattctatccagagaacaagtttgcc
caaggggagtatgatgactaa

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