Cucurbita moschata (crookneck pumpkin): 111461789
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Entry
111461789 CDS
T05248
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
cmos03015
mRNA surveillance pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111461789
09122 Translation
03013 Nucleocytoplasmic transport
111461789
03015 mRNA surveillance pathway
111461789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111461789
03041 Spliceosome [BR:
cmos03041
]
111461789
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111461789
Spliceosome [BR:
cmos03041
]
Complex C
Other components
EJC/TREX
111461789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
111461789
NCBI-ProteinID:
XP_022961208
UniProt:
A0A6J1HB67
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR
GFREESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK
NTRPTRERRSRSPRRRY
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgctgatgtagaggctgttgacttcgagcccgaggaagacgacctcatggac
gaggatggagccgccgaagccgatgcctctccccgagctccttttcctaagctcaaatcc
gccattaccggtggcgcatcttcctcgctggccggtggtccaaagaagaccaagggtcgt
ggatttcgagaagagtctgatcgtaacacccgccttactgggtccgacttcgattccctc
aagtctgctgatggccctggcccccaacgatctattgaaggatggatcattctggtaact
ggtgtacatgaagaggcacaggaggatgatctacaaaatgcatttggtgagtttggggag
ataaggaatttgcatctaaacctcgatcgtcgtactggattcgtcaagggatatgcgttg
atcgaatacgagaactttgaggaagcggagaaagcaatatctgccatggatgggtctgaa
cttctgacccaaattatcaatgttgattgggcattcagccatggacccatcaggaggaag
aacacaaggcctactcgggaacgacgctcaaggagtcctaggaggagatattag
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integrated database retrieval system