KEGG   Cucurbita moschata (crookneck pumpkin): 111461789
Entry
111461789         CDS       T05248                                 
Name
(RefSeq) RNA-binding protein Y14-like
  KO
K12876  RNA-binding protein 8A
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013  Nucleocytoplasmic transport
cmos03015  mRNA surveillance pathway
cmos03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111461789
  09122 Translation
   03013 Nucleocytoplasmic transport
    111461789
   03015 mRNA surveillance pathway
    111461789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111461789
   03041 Spliceosome [BR:cmos03041]
    111461789
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111461789
Spliceosome [BR:cmos03041]
 Complex C
  Other components
   EJC/TREX
    111461789
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 111461789
NCBI-ProteinID: XP_022961208
UniProt: A0A6J1HB67
LinkDB
Position
Unknown
AA seq 197 aa
MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGGPKKTKGR
GFREESDRNTRLTGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
IRNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGSELLTQIINVDWAFSHGPIRRK
NTRPTRERRSRSPRRRY
NT seq 594 nt   +upstreamnt  +downstreamnt
atggcgagcgctgatgtagaggctgttgacttcgagcccgaggaagacgacctcatggac
gaggatggagccgccgaagccgatgcctctccccgagctccttttcctaagctcaaatcc
gccattaccggtggcgcatcttcctcgctggccggtggtccaaagaagaccaagggtcgt
ggatttcgagaagagtctgatcgtaacacccgccttactgggtccgacttcgattccctc
aagtctgctgatggccctggcccccaacgatctattgaaggatggatcattctggtaact
ggtgtacatgaagaggcacaggaggatgatctacaaaatgcatttggtgagtttggggag
ataaggaatttgcatctaaacctcgatcgtcgtactggattcgtcaagggatatgcgttg
atcgaatacgagaactttgaggaagcggagaaagcaatatctgccatggatgggtctgaa
cttctgacccaaattatcaatgttgattgggcattcagccatggacccatcaggaggaag
aacacaaggcctactcgggaacgacgctcaaggagtcctaggaggagatattag

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