Cucurbita moschata (crookneck pumpkin): 111461792 Help Entry 111461792         CDS       T05248                                  Name (RefSeq) protein CTR9 homolog isoform X1   KO K15176   RNA polymerase-associated protein CTR9 Organism cmos  Cucurbita moschata (crookneck pumpkin) Brite KEGG Orthology (KO) [BR:cmos00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmos03021]     111461792 Transcription machinery [BR:cmos03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     PAF1 complex      111461792 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_1 TPR_2 TPR_12 TPR_8 TPR_19 TPR_16 TPR_14 TPR_17 TPR_CcmH_CycH TPR_11 TPR_7 TPR_9 TPR_6 TPR_10 ANAPC3 ARM_TT21_N ARM_TT21_5th ARM_TT21_C TPR_Slam Fis1_TPR_C NatA_aux_su DUF6584 UBA_N4BP1 Motif Other DBs NCBI-GeneID:  111461792 NCBI-ProteinID:  XP_022961214 UniProt:  A0A6J1HDD6 LinkDB All DBs Position Unknown AA seq 1077 aa AA seqDB search MACVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFERVLQLDPENVEALVALAII DLNTNEAGRIRNGMEKMQTAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYHGLGQVQLKMGDFRS ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQEYLRKATKIDPRDAQAFLDLGELL ISTDEGAALDAFKTASILLRKEGREVPTEVLNNLGVLHFEREEFELAERIFKEALGDGIW LDFIDGKLRWPAIEASASVLQYKDMEFFYQLEREGRSIVLPWKKVTSLFNLARLLEQLHK IEVASVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS KELYTRVLVQHPANLYAANGAAVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLSRTYYEAEQWQDCKKTLLRAIHLA PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQVRQRQELARQVALAEDARRKADEQRKFQ LERRKLEDEERRMMQQEQHFKRVKEQWKSTTPAKRRERSEIDDDEAGDSEKRRRKGGKRR KKDRKGKSHYETEEADNDMMDDQELDNEDNNISYRESRSQMNYQDDDLEGNDQDALAEAG LEDSDAEDEAGVPSSNAARRRATWSESEDDEPMNMQRESRLQRENSAGLEGSDGEIR NT seq 3234 nt NT seq  +upstreamnt  +downstreamnt atggcttgtgtgtacataccggtgcagaactcggaggaggaggtcagggtagttctcgat caactccctagggacgcttccgacattctcgacatactcaaggccgagcaagctccgttg gatctctggctaatcatcgcgagggaatacttcaagcaaggaaaattggaacaattccgt caaattctggaagaagggtctagcccagaaattgatgagtactatgctgatgttagatat gaaagaatcgcaatcttaaatgccttgggtgcatactacagctatctgggaaaaattgag acaaaacaacgagaaaaagaagaacatttcattttggctacacaatattacaacaaagca tcaagaattgacatgcatgagccttcaacttgggttggaaaaggtcagcttttattgacc aaaggggaagtagaacaggcgtttgctgcattcaagattgttttagatggagatcgtgac aatgttcctgctcttctaggtcaggcatgtgttgaattcaaccgtgggcattattctgaa tcattagagctgtataagagggccttgcaagtttatcctgattgccctgctgctgtaaga cttggcataggcctctgccgctatcaattgaaacaatacggaaaggctcagcaagcattt gagagagttttgcagttggatccagaaaatgtcgaggcacttgttgctctagcaatcatt gatctgaacacgaatgaagctggtcgaattagaaatgggatggaaaagatgcagacggca tttgaaatataccctttttgtgcaatggctctgaattacttggcaaatcactttttcttt accggtcaacactttttggtggagcaattgactgaaactgcacttgccattactaaccat ggacctacaaagtctcattctttttataatcttgctcggtcttaccatagcaagggagac tacgagaaagctggcttgtactacatggcatctgcaaaggaagctaataaaccccgtgag tttgtatttccttatcatggtttgggtcaggttcaactgaagatgggagattttagaagt gctctatcaaactttgagaaggttttggaggtttatcccgacaactgtgagacattgaaa gtacttggtcatatttatgttcagcttggacaggctgagaaggcccaggaatatttaagg aaagctacaaaaattgatccacgtgatgcacaggcttttttagatctgggagaattgttg atttcaactgatgaaggtgctgctttggatgccttcaaaactgctagcattctattaaga aaggaaggtcgagaagtacctactgaagtgctcaacaatctgggggttcttcactttgaa agagaagagtttgagcttgctgagcgaattttcaaggaggctttaggtgatggaatttgg ctagattttattgacggtaaattgagatggcctgctattgaagcaagtgcgtctgttctt caatacaaggacatggaattcttttatcaactggagagggaaggtcgttcaattgtacta ccatggaaaaaagtcacaagtctatttaacctggctcgattgttagagcaattgcataaa attgaagttgcaagtgtactttaccgcttgattttgtttaagtatccagactatgtagat gcttacctgaggcttgcatccattgcaaaagctagaaattatgttcaattaagcattgaa ttggttaatgatgctctgaaggtgaatgacaagtgctcaaatgccctttctatgctaggc gagcttgagttaaaaaatgatgactgggtcagggcaaaagaaactttccgggctgcaggt gaagccaccgatggaaaggattcttatgcgactctttctctggggaactggaactacttt gctgcacttcgaaatgagaaaagaaatcccaagttggaagctactcatttggaaaaatcc aaggaactatatacaagggttctggtacaacatcctgctaatttgtatgctgctaatgga gctgcggtaatcttggctgagaaaggtcaatttgatgtttcaaaggatatttttacacaa gttcaagaagctgcaagtgggaacatttttgtccagatgccagatgtgtggatcaatttg gcacacgtctattttgctcaaggaaatttttcattggctgttaaaatgtatcaaaattgc ttgcggaagttttattacaatacagattatcaaattcttctatatctatctcgtacatat tatgaagctgaacagtggcaagactgcaaaaagaccctactgagagctatccacttggca ccttcaaattacactttaagatttgatgctggtgtagcaatgcagaaattttcagcttca acactacaaaagacgaagaggactgcagatgaggtgcgttcaacagtagcggagctggaa aatgctgttcgtgtttttagtcagttgtctgctgcttccaacctccactttcatggcttt gatgagaagaagattgatactcatgttggttactgcaagcacttactagaggctgcagga gttcacctcaaagcagcagaacatgaagagcagcaggtccgtcaaagacaagaactagca cgtcaagttgcattggcggaggatgcccgtcgtaaggcagatgagcagaggaaatttcaa ttggagaggagaaagctggaagatgaggaaagacggatgatgcaacaggagcagcatttt aaacgtgtgaaggagcaatggaagagcaccacacctgctaaacgaagagaaaggtcagag attgatgatgatgaagctggtgatagtgagaagaggagaaggaagggtggaaagaggaga aagaaagaccggaaggggaaatcacattatgagacagaagaggccgacaatgatatgatg gatgatcaagaactagacaatgaagataataacataagttatagggagtcccggagccaa atgaattatcaggacgatgatttggaagggaatgatcaggatgcccttgcagaagctggg cttgaagattctgatgccgaggatgaagcgggtgtaccttcatccaatgcagcccgacga agagccacatggtcggaatctgaagatgatgagcctatgaatatgcaacgagaatcccga cttcaaagagaaaactccgcaggactagagggtagtgatggagaaatcagatga

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