KEGG   Cucurbita moschata (crookneck pumpkin): 111461814
Entry
111461814         CDS       T05248                                 
Name
(RefSeq) protein PIR isoform X1
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111461814
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     111461814
   Factors involved in mRNA localization
    Other mRNA localization factors
     111461814
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd
Other DBs
NCBI-GeneID: 111461814
NCBI-ProteinID: XP_022961250
UniProt: A0A6J1H9U6
LinkDB
Position
Unknown
AA seq 1285 aa
MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKA
LNQLNALIHEGKEMASVLYTYRSCVKALPQLPESMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPSVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDSDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQILIV
FAVESLELDFALLYPERHVLLRILPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSIYFQKFAAQARLLTLPAPHELPPREAQEYQRHYLIINHIGAI
RAEHDDFTIRFASSMNQLLLLKSTENPDIEWCKDVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKDVISLESHETSSFSDYEKVVRHNYSAEERKALVELVSYIKSIGSMMQQCD
TLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKEISRILSDMRTLSADWMANRSKSES
EAQSMQRGEESKVNFFFPRPVAPTATQVHCLQFLIYEVVSGGNLRKPGGLFGNSASEIPI
NDLKQLETFFYKLSFFLHIFDYTATVATLTDLGFLWFREFYLETSRVIQFPIECSLPWML
VDYVLESQNAGLIESALFPLDIYNDSAQHALVTLKQRFLYDEIEAEVDHCFDIFVSKLCD
SIFTHYKSWAAREMLDSSFLFAIDNGEKYSVQPIRFNALLKITRVKLLGRTIDLRSLVAQ
RMNKIFRENLEFLFDRFESQDLCAILELEKLMDVLKVTHELLSKDLLIDSFSLMLNEMQE
NLSLVSFSSRLASQIWSEMQNDFLPNFILCNTTQRFVRLSKVPSVPVQKPSVPHAKPNFY
FGTQDLNSAHQSFARLHSGFFGLTHMFSIARLLGSRSLPWLIRALLDHISNKIAVLEPMI
SGLQEALPRSIGLLPFDGGVAGCMRSINENLNWEAKSELRLEVLHGIKEIGSVLYLISLL
DIVLRELDITHFMQTAPWLGIIPGVDGQIFHSQDGESPIVSLFKSATSAAVSNPGNPNGM
SYYTMSKQAEAADLLYRSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFVDITTSKD
FYRIYSGLQIGYLEESAQSPSNNHELLGDSVAWGGCTIVYLLGQQLQFELFDFSYQVLNI
AEAEDGTFVQTHKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSG
APLHRVKFENTVSAFETLPQKGAVN
NT seq 3858 nt   +upstreamnt  +downstreamnt
atggctgtccccgtcgaagaagccattgctgcgttgtccacattctcccttgaggatgac
cagccagagttgcaaggacctggcgtttgggtgtcaactgagagaggcgcaaccgagagt
ccaatagagtacagtgatgtttccgcatatcgtttatctctagcagaagacaccaaagct
ctcaatcagttgaatgcacttatccatgaggggaaggagatggcatcggtgctttataca
tatagaagctgtgttaaagcacttccacagttacctgagtctatgaagcaaagtcaagct
gacctatatttggaaacgtatcaagttttggacttggaaatgagtcgtctacgtgagatt
cagaggtggcaagcatcagctgcatcgaagcttgctgctgatatgcaacgtttctcgagg
cctgagaggcgcattaatggcccatcagttactcatctctggtcaatgctgaaattgctt
gatgttttagttcaacttgatcatcttaaaaatgctaaggcaagcatacccaacgacttc
tcttggtataaaaggaccttcacacaagtcagtattcagtggcaagattctgattcaatg
agagaagaattagatgacttacagattttcttaagcacacgatgggccattttattgaat
ctgcatgttgagatgtttcgtgtaaacaatgtagaagacattcttcagatcctcattgtc
tttgctgtggagtccttggagttggattttgcacttctatatccagagaggcatgtgctt
ttacgtattctgcctgttcttgtcgtattagcaacatcatcagagaaggacagcgaatca
ctttataagagggtgaagatcaacagactcattaacatctttaagaatgatcctgtgatt
ccagcatttccagatcttcatctttctcctgcagcaatcttgaaagagttgtcgatatac
ttccaaaaatttgctgctcaagctcgtcttcttactcttccagcgccacatgagcttcca
ccacgtgaagcacaagaatatcagagacattaccttatcatcaaccacattggagcaatc
cgtgcagagcacgatgatttcaccattcgatttgcgtcatcaatgaatcagctgctgctg
ttgaaatcaacagagaatccagatattgagtggtgcaaagatgttaaaggaaacatgtat
gacatggttgttgaaggttttcaactcttgagcagatggactgcacgtatttgggaacaa
tgtgcatggaaattctctcgcccatgcaaagacgttatttctttggaatctcatgaaacc
tcgtcattctcagactatgaaaaggtggtgagacataattatagtgcggaggaaaggaaa
gctcttgttgagctggttagctatataaagagcattgggtcaatgatgcagcagtgtgat
actctggtagctgatgctttgtgggaaacaatacatgctgaggttcaagattttgttcaa
aacacattggcaaccatgttgcgaacaacattccggaagaagaaagaaatttcaaggatt
ctttctgatatgcgaaccctgtcagctgattggatggcaaatagaagcaaatctgaatct
gaagcacagtctatgcaaagaggtgaagaaagtaaagtgaacttcttttttccacggcca
gttgcgcctacagctacgcaggttcattgcttgcaatttctgatttatgaggtggtgtct
ggtggaaaccttaggaagccaggagggctttttgggaatagtgcgtctgagattcccatt
aatgatttgaagcagttggagacctttttctacaagctcagcttctttctgcacatattt
gattataccgcgactgttgcaacattaactgatcttggattcttatggtttagagagttt
tatttagagacttcacgggttattcagtttcctattgaatgctcccttccctggatgctg
gtggattatgtcctcgagtctcagaatgcaggccttattgagagtgctttatttccactt
gacatttacaatgattcagctcaacatgccttggttactttgaaacaacgttttctctat
gacgaaattgaagctgaggtcgatcattgtttcgatatatttgtctctaagctatgcgat
tcaatctttacacattacaagagttgggccgcgagagagatgctcgattcatctttctta
tttgccatagacaatggagaaaaatattctgtccagcctataaggtttaacgcccttcta
aagatcactagagtaaagttacttggaaggactattgatttaagaagcttggttgcccaa
cgaatgaacaaaatttttcgagagaaccttgaattcttatttgatcggtttgagtctcaa
gatctttgtgccattttggaattggaaaagctgatggatgtcctgaaagtgacccacgaa
ttgctatccaaagatcttttgatagactcatttagtctcatgctaaatgagatgcaagaa
aatctatctcttgtatcattctctagccgattggcttctcagatttggtcagagatgcaa
aatgacttcttaccgaactttatcctatgcaatactactcagcgatttgtaagattatcc
aaagttccatctgttccggttcaaaaaccatcagttcctcatgccaagcctaacttctac
tttggtactcaagacttgaattctgctcatcaaagttttgcacggttgcatagtggattc
tttgggttgactcacatgttttccattgcgagacttcttggatctagatccttaccatgg
cttattcgagcacttctggatcatatatcaaataagattgctgtacttgaaccaatgata
tcaggattgcaagaagcgttgccaagatctataggattactaccatttgatggaggtgta
gcaggttgcatgagatcgatcaatgaaaatctaaactgggaagcgaagtcagagctcagg
ttggaggtcctgcatggaataaaggagattggaagtgtgttatatttaattagccttctt
gatattgtgctgagagaattagacatcacgcatttcatgcagacagcaccttggttaggg
ataattcctggtgttgatgggcaaatatttcattctcaagatggagagagccctattgtt
agcctattcaagtcggcaaccagtgcagctgtttcaaatcctggaaaccctaatggaatg
tcatattataccatgtcaaaacaggctgaagcagcagatcttctgtatagatctaacttg
aatactggaagcgttctagaatatgcacttgcttttacaagtgctgctttggataaatac
tgtagcaaatggagtgctgctcccaagactggattcgttgatatcactacttcaaaagat
ttctataggatatatagtggactccaaataggctacctggaagagtctgctcaatcacct
tcaaacaatcatgaactgcttggtgattctgtagcttggggtggttgcacaatagtctac
ctgctcgggcaacagctacaatttgagctgtttgatttttcgtaccaggttctgaatatt
gctgaggcagaggatggaacatttgtgcaaactcataaaaattcccattatatgcagggc
tgggaatccttaatagaagccatgaagaaggccagaagattgaacaaccatgtattctca
atgctgaaggcacgttgtcctcttgaagacaagacggcatgtgccatcaagcagagtgga
gctcctcttcatcgtgttaaatttgagaacactgtctctgcttttgaaacactgccccag
aaaggtgctgtcaactaa

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