Cucurbita moschata (crookneck pumpkin): 111462511
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Entry
111462511 CDS
T05248
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111462511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111462511
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111462511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111462511
NCBI-ProteinID:
XP_022961912
UniProt:
A0A6J1HBD5
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MIDCLVIEKMESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIMRDRSTGRARGFGF
VVFADPAVAERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVG
GLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHEL
NGKMVEVKRAIPKELTPGSNRSPIVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGR
LSPAISSRTGIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRF
ITPIGYSGGNGRGDSLLSSSTWNVWGNGSMNNAMNSPDPGAFSGSGMGNFRVAYGNDDNW
SSAAVGNHVGVNAPPGYTNNNGYGIGESEFGIRGGSYGRNGVVSSVATRKAFAETTDGYE
RSYRELYRDGMVHEDSTWPSTTPELDGSVPFGYGLGSLPSDDPAKSSENFLASYDVSSRQ
SSRGIAA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgattgattgtttggtaatagaaaagatggaatcggatcttggcaagctcttcattggc
ggaatttcttgggatactgatgaagagcgtcttagggattattttggtagctatggcgaa
gtggttgaggctgtgatcatgagggatcgttccactggccgtgctcgtggctttggattt
gttgtctttgcagatcctgcggttgccgaaagggttattttggagaagcacatcatcgat
ggccgcactgttgaagctaagaaggctgttccaaaagatgatcagaacacattgaacaga
aacaatggtagcatccatggttctcctatctcgggacgaacaaagaagatttttgtggga
ggtttagcctcgacagtcacggaggccgactttcagaagtattttgatcagtttggcaca
attactgatgttgttgttatgtatgatcacagcacgcagaggccgaggggtttcggcttc
attacttatgactcggaggaggcggtcgatcgtgtgctgcataagaccttccatgagctc
aatggaaagatggttgaggtgaaaagagcaattccaaaagagctaaccccagggtccaac
cgaagtcctattgtaggatataactatggtatgagtagagctagtggttttcttaacagc
tatactcaaagctataacatgagtcctctcggaagttacggagtccgagcagatggtagg
ttgagtccagctattagcagtcgtaccgggattcctcatttcggtactaataactatgga
gttggtgtgaatttggagcaaggactgaggcaaggctatggtaggagtttgaacattatg
aacagccaagcacaggagcaaatgttgaattcctattacaatgggaattcaaataggttc
attaccccaattggctacagtgggggaaatggaagaggtgattctctgttaagctcgagt
acgtggaatgtgtggggaaatggaagtatgaacaatgccatgaactcgcccgaccctggc
gctttctctggctctggaatggggaacttccgagtggcgtatggaaacgacgataattgg
agttctgctgctgttggtaatcatgttggagtgaatgctcctcctggctacactaataac
aatggttatggtattggagagagtgagtttgggatcagaggaggaagctacggaagaaat
ggagtagtctcaagcgtggcaacacgaaaagccttcgctgaaacgaccgatggttacgag
aggtcgtatagggagctgtatcgtgatggaatggtgcatgaggattcaacatggccgtct
accactcccgaactggatggttctgtgccttttggttatggtcttggtagccttccttca
gatgatccagccaaaagctctgagaattttcttgctagttatgatgtttcaagcagacag
tcatctagaggaatcgctgcgtag
DBGET
integrated database retrieval system
