Cucurbita moschata (crookneck pumpkin): 111462905
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Entry
111462905 CDS
T05248
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111462905
Transcription machinery [BR:
cmos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111462905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_31
KIF21A
Motif
Other DBs
NCBI-GeneID:
111462905
NCBI-ProteinID:
XP_022962483
UniProt:
A0A6J1HEX7
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MGTSFRPNLKWAFQIQTHSRRASPSKLSPYASKGREASFNSGRLSFFSSTCEEGEAISRE
ALKTYTCLSEAPQTLADGLLDLEEKEIEINSGAKSLGHLRYGSKNSGPSKVEDNFCSCTS
LPTGRASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNACLSRTLKASS
SFRDLSDLPIEVGGDHNVNQKTDDQNDNIIVYSGKRAGRRSVKRRAMDNADKVASRPLAT
RAAKEKFRSSRKKASNSKKRRSIVARNEAEMSTGVKVVANLERIRETSEKESGRTASMSC
WADAASIDIKDLQKQLQFGWFCQDELLRSTNSLVIFLAKKYRCSGLPMEDLVQAGAIGVL
QGVERFDPKRGFRFSTYIQYWIRKSMSRVVARSSRGIQIPWSLTKAINQIQKARKALNNS
GRRYSDDDIAKATGLPLAKVRVASNCLKVVGSVDQKIGDGLNMKYMELTADTSIESPEDT
VKRRLMKKDIFNLLEVLESRERQVLVLRYGLMDSQPKSLEEIGKLLCVSKEWVRKIERKA
TTKLKNEETVRNLSHYLD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgagtttccgcccaaatctcaagtgggctttccaaattcagactcattcccgc
cgggcctccccttccaagctctctccctatgcctctaaaggcagggaagcttcctttaat
tcgggaaggctttcgttcttctccagtacttgtgaggaaggagaggctatctctagagaa
gccttgaaaacatacacttgcttgtctgaagctccacaaaccttagccgatggtctgtta
gatttggaagagaaagagatagagataaacagtggggcaaagtcactcggtcatttgcgt
tacggttcgaaaaattctgggccatccaaggtagaggacaatttttgttcctgtacgagc
ttgcctactggcagggcgtcgccttttggcatgttaatggaaaaccttgatgttttggag
gaaacttttactgaatcaggcatgctaagcttggaaagagatatcgtattgcaactaaca
aaacttggagctttggagttttttaatgcctgtctatctaggacgcttaaagcatcatca
agttttcgtgatttgtcggacttacctattgaggttggtggagatcataatgtaaaccag
aaaactgatgaccagaacgacaatatcatagtttactctggaaaaagagcaggaagaaga
tcagtaaaaaggagagcaatggataatgctgataaagttgcttcacggccgctagctaca
agagctgctaaagaaaaattccgtagttcgaggaaaaaagcatctaattcgaaaaaaaga
agatcgattgttgcgcgaaatgaagctgaaatgtccaccggggttaaggtagttgcaaat
ttagaaagaattagagaaacttcagaaaaggaatccggaagaacagcaagcatgagttgc
tgggccgacgcagccagcattgatataaaggacctgcagaaacagttacaatttggctgg
ttctgccaggatgagctcttaaggagcacgaattcattggttatattccttgcaaagaaa
tatcgatgctccgggttaccaatggaggacttggttcaggcaggagccattggcgtgctg
caaggtgtggaaaggtttgacccgaaaaggggttttagattctcaacctatattcaatac
tggataaggaaatcaatgtcgagagtcgtggcacgaagttcaaggggaattcaaattcca
tggtcattaaccaaggcaataaatcaaatacagaaggctcgaaaagcgttgaacaacagt
ggtaggagatattcggatgacgatatagccaaggctactggtcttcctttggccaaggtt
agagttgctagcaactgtttaaaagttgtgggttcagttgatcagaagataggtgatgga
ctaaatatgaaatatatggaattgacagcagatacatcaatagagagcccagaagacact
gtgaagcggaggctaatgaagaaagacatctttaatcttcttgaagtgttggaatcaagg
gagagacaggtcctggtgctgcgatacggactcatggattcccaaccaaagtcactcgag
gaaatcggaaaacttctgtgcgtaagtaaggaatgggttcgaaaaatcgaaaggaaagcc
acaacaaagcttaaaaatgaagagacggtgagaaacttgagccattatttggattga
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