Cucurbita moschata (crookneck pumpkin): 111463116
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Entry
111463116 CDS
T05248
Name
(RefSeq) lissencephaly-1 homolog
KO
K20241
WD repeat-containing protein 44
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111463116
Membrane trafficking [BR:
cmos04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
111463116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_HPS5
WD40_RFWD3
Ge1_WD40
WD40_like
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
RMC1_N
Beta-prop_IP5PC_F
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
111463116
NCBI-ProteinID:
XP_022962704
UniProt:
A0A6J1HDZ0
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MLSSDRDTDVFFDSEDYLPLEDSLVAEEVGSNKLGYEIWMSEPQSIKRRRQRFLQEVGLL
EFASSRTCAHDLVIESSDSSGRMELERLTEFSGAVSSSDYAPTCNVEENDLELCSNEMLL
PVSVSNSGSRRCHGEADVEGCRDIDVGKRKIKKWWRSFKNKAASLRSTEFSEELKTIPAK
SKTCRMKVYQNKKRCSEFSALYMRQQIVAHKGLIWTMKFSPDGKYLASGGEDGVVRVWRI
SSANASTEFLANDGNYNNKPREGKSSFSSKPLRFATVVIPEKVFQIDEQPVQEFYGHSSD
VLDIAWSNSNCLLSSSKDKTVRLWGVGSDQCLGVFHHKNYVTCIQFNPMDENYFISGSID
GKIRVWSVLKQRVVDWADVRDVITALAYQPDGKGFAIGSITGTCRFYKTSGDYFHLDAQI
NVQGRKKASGKRITGIQFCRENSQRVMITSEDSKVRIFEGTEIVNKYKGLPKSGSQMSAS
FTKNGKHIISVGEDSRVYMWNYDSLHLSSMKETKSQQSCEHFLSDGASVAIPWPGLGTEL
KCFGNNQRQFSQRQDNQGASERFSLANWFSADNLCRGSTTWPEERLPLWDLPVADDEHGN
LEHHNSQSDAHDHVAPPDTWGLVIVVAGLDGTIKTFHNYGLPIRL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttctgacagagacacagatgttttcttcgactcagaagattacttgccatta
gaggactccttggtagcagaagaagtgggttccaacaagttgggatatgaaatatggatg
agtgagccacagagcattaagaggagaagacagcgttttcttcaagaagttggattactt
gaatttgcgtcttcaagaacttgtgcacatgatttagtgattgaatcaagcgattcatca
gggaggatggaattggagagacttacagaattcagtggagctgtctcaagttctgactat
gctcctacctgtaatgtggaggagaatgatttagaactatgctcaaatgagatgcttcta
ccagtttctgtttcgaactccggttctcgacgttgccatggcgaagctgatgtcgaaggt
tgccgggatattgatgtcggtaaaaggaaaataaagaagtggtggagatcattcaagaac
aaggcggcgagcttaagaagtacagagttttctgaggaattgaaaacaatcccagcaaaa
tccaaaacttgcagaatgaaggtgtatcaaaacaagaagagatgctcagagtttagtgct
ttgtatatgagacagcagattgttgcacacaagggcttgatttggacaatgaagtttagt
ccagatgggaagtatttggcaagcggaggagaagacggagtcgtacgcgtatggcgtata
tcgtctgcaaatgcatctactgaattcttagcaaatgatggtaattataataacaaacca
agagaagggaagtctagcttcagcagcaaaccgttgagatttgccactgttgtcattcct
gaaaaggtttttcagattgatgagcagccagtgcaagagttctatgggcattccagtgat
gtcttggacatagcttggtccaattcaaactgtcttctttcatcatcaaaggataaaact
gtgcgcttgtggggagttggctctgatcaatgtcttggtgttttccaccacaagaactat
gtgacttgtatccaattcaatccaatggatgaaaactacttcatcagtggctcaattgat
ggcaaaatccgagtttggagtgtgttgaaacagcgggtggttgattgggctgatgtccga
gatgtcattactgctttagcttatcaaccagatgggaagggttttgctattggctcgatt
accggcacgtgtcgtttctacaaaacatcaggtgattattttcatttggatgcacagatc
aatgttcaagggcgaaaaaaggcctcgggcaaaaggatcactggcattcagttttgccgg
gaaaactctcaaagagtgatgataacttcggaagactcgaaagtacgcatattcgaagga
accgaaatcgtcaacaaatataaaggtctaccgaagtcggggagtcagatgtctgcttct
tttacaaaaaatgggaagcatataatatctgtaggagaggactctcgtgtatatatgtgg
aactatgatagtcttcacctctcatcaatgaaagagacgaaatctcagcagtcttgtgag
catttcttgtctgatggtgcttctgttgctataccatggcctggtcttggaacagagctg
aaatgctttggcaacaaccaacggcagttctcacagagacaggataaccaaggggcttca
gagcgtttttcccttgctaattggttctctgctgataatctgtgccgtggatccacaaca
tggccagaagagaggctacctctctgggatttaccagttgcagatgatgaacatggcaac
ctggaacaccataatagtcagagcgacgcccacgaccatgtagctccacccgacacatgg
ggccttgtgattgtcgttgctggattagatggaactataaagacattccataactatgga
ttgcccatcaggctttag
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