Cucurbita moschata (crookneck pumpkin): 111463451
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Entry
111463451 CDS
T05248
Name
(RefSeq) uncharacterized protein LOC111463451
KO
K10756
replication factor C subunit 3/5
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030
DNA replication
cmos03410
Base excision repair
cmos03420
Nucleotide excision repair
cmos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111463451
03410 Base excision repair
111463451
03420 Nucleotide excision repair
111463451
03430 Mismatch repair
111463451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmos03032
]
111463451
03036 Chromosome and associated proteins [BR:
cmos03036
]
111463451
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111463451
DNA replication proteins [BR:
cmos03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111463451
DNA Replication Termination Factors
ELG1-RFC complex
111463451
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111463451
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111463451
Check point factors
HRAD17(Rad24)-RFC complex
111463451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
Rad17
AAA_16
Motif
Other DBs
NCBI-GeneID:
111463451
NCBI-ProteinID:
XP_022963157
UniProt:
A0A6J1HGX7
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MCPALNLMKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANI
SPPGSRRNNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSR
KEEKLTYSHGSNRISQKPNHNRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSIL
HQSKEVSQVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGMAIGMN
NNATGKRNAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGTGLSTTTTNSAAVSR
ENSSRISTESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFD
EATFIERANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPRGS
GKRVLIMALLREIYGDSCWNVSHDLRRFQIQERKLTQVFVPLTSSAHHVELNLSSEANAK
YALLGLAKEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACK
VVLCCDNDTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDVPMNFASKIATKAK
QNLRKAIMALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKL
LVESVHPKLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKF
MSMYRKSSTNLVYDR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccagctctgaatctaatgaagcagaggaaggatggatatgaaccgtctgatacg
gagacagaatggcaagagagcccttggaatgaccctaaggcgaagaaacttgtactggat
tacaataaccgacgagcagattcggcagcatcgaagaagttcagtactgcagcgaatatt
tctcctcctggttcgagaagaaacaatggcaaaacacctcacaggccggccaaagacgac
agtgttctagtcatgcatcagagaaacatcagccccttgtcgagagcagaaagaagaaga
cacaaatcaccttttaaagctggagcagaggaaattggaagctctagcatgaggtcaaga
aaagaggagaagttgacttattctcatgggagtaacagaataagtcaaaagccaaaccac
aatagaagatcagtgactgctccaaggttgagaacaagagatgaacatatgagtgctgtt
aacgatttatctcaaaggagagacagagctgctccatccttgcaggtcaactccatcctg
caccagtcaaaggaggtttctcaagtgaactctctttctgttggtgaaatgaacgagatg
attgcagatggaagggtccatagaggttcgatttttaatgaaccgatggttgaaagcacg
gggtcaatctcaccgggggacatattcttttcgcgtgatggcatggctattggaatgaat
aacaatgccacaggaaagagaaatgcattcaagaattatataagtccaaggcctaacttt
gtgtccaaaaagaatgatgatacttataatcaagttgaagtaaatgctaatggtagaggg
gttacttctgctggaacaggtttgtcaacgaccacaaccaatagtgctgctgtaagtaga
gaaaatagtagtagaattagcactgaaagtagtaagatcagtgatgtgagtggaagaaca
agtgaaagtacaagaaggtttatagccagtagacgaaagaagaagaacgagatgtggttt
tcttgtatgaggaatgggccctgcaggacgacgaaatcgcccgaaaagcgggagttcgat
gaagctacattcattgaaagagcaaatgttgttgaatacttgaaacccttttgggcagat
aagcatcgaccggtgtccttaagtggattcgctttccataagcctgaggcgcaaactctc
aagcaattagttttacaagacagttttccccacatcctgttcaagggtccgcgcggatct
ggcaaacgagtgctcattatggctcttttgcgtgagatatatggcgattcatgttggaat
gtttctcatgatttgcgacgtttccagattcaggaaagaaaactaacgcaagtctttgtt
ccattgacgtcaagtgctcaccatgtggaactaaatttaagctcagaagcaaatgctaag
tatgctctactgggattggctaaagaaataggaagtgaatattccattaacgtggaagca
agaaatctcaatccgaaggctagtttcaaagtggtaatccttttagatgtagacaaagct
gtagaggatattcaacatttgcttaggtggattatggatggctataaggatgcctgcaaa
gtagtactctgttgtgacaacgacacaggcatccttgactcagtgataagccgctgcaaa
gttatcaaaattaaccctccagtaactcatgaaatcatagatgtacttatccaaatagca
aagaaggaggaatttgacgtgcctatgaacttcgcttctaagattgctactaaagcaaag
cagaacctgagaaaagcaatcatggcgcttgaagcatgcaaggcacacaattatccattt
tctgatgaccagccaatccccattggatgggaagaggccgtggtagaactcgcagctcat
atcctcgaagacccgacgaatccaagattacacctagtaaaagaaaaaattcagaagctt
ctagttgagtcagttcatccaaaactaatcctccagaagctcgtggaagaatttctgaaa
agaattgagctgaggtcaaggagggaactttattactggcatgcttattataacaagagg
ctcccaactgaaactggaacgggcgccttacccaaattggaagaattcgtggcgaagttc
atgagcatgtacaggaagagctccaccaacctcgtttatgatcgataa
DBGET
integrated database retrieval system
