Cucurbita moschata (crookneck pumpkin): 111463461
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Entry
111463461 CDS
T05248
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030
DNA replication
cmos03410
Base excision repair
cmos03420
Nucleotide excision repair
cmos03430
Mismatch repair
cmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111463461
03410 Base excision repair
111463461
03420 Nucleotide excision repair
111463461
03430 Mismatch repair
111463461
03440 Homologous recombination
111463461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmos03032
]
111463461
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111463461
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111463461
DNA replication proteins [BR:
cmos03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
111463461
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
111463461
MMR (mismatch excision repair)
DNA polymerase delta complex
111463461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
111463461
NCBI-ProteinID:
XP_022963175
UniProt:
A0A6J1HH88
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MNKGSARKSRPPPQNTSPAPPAKHQALSQEEDFVDEDVFLDENLLDEDALILRDIEERQA
LASRLSKWTRPPLSQEYVSQSKSIVFQQLEIDYVIGESHRELLPNLSGPAAILRIFGVTR
EGHSVCCHVHGFEPYFYISCPPGMGPDDISLFHQTLEARMKEMNRNSKAPSFVRRIELVQ
KRSIMYYQQQTSQSFLKIVVALPTMVASCRGILDRGIQIDGFGMKSFMTYESNVLFALRF
MIDCNVVGGNWIEVPVGKYKKTVRNLSYCQLEFDCLYSDLISHAPEGEFSKMAPFRILSF
DIECAGRKGHFPEPTKDPVIQVANLVTLQGEDQPFIRNVMTLNSCSPIAGVDVLSFDTER
EVLLAWRDLIREVDPDIIIGYNICKFDLPYLIERAEALKIAEFPILGRIRNSKVRVKDTT
FSSRQLGTRESKEITVEGRVQFDLLQAMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSIIS
DLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKV
LSQLLRKAKQKNLVIPNAKQAGSDQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMA
YNLCYCTLVTPEDVRKLNLPPEHFNKTPSGEIFVKPNLQKGILPEILEELLTARKRAKAD
LKEAKDPFEKAVLDGRQLALKISANSVYGFTGATVGQLPCLEISSSVTSYGRQMIEHTKK
LVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVPSVEAAMILGREAADYISGTFTKPIKLE
FEKVYYPYLLISKKRYAGLFWTNPNKFDKMDTKGIETVRRDNCLLVKNLVNECLHRILID
RDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAAT
APNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENSIPIDPQYYLENQMSKPLLRIFEPIL
KNASKELLHGSHTRSIFISTPSNSGIMKFAKKQLTCIGCKALLSKADHTLCAHCKGREAE
LYCKAVENVSDLEMVFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKQL
LERWNF
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagggcagcgctcggaaaagtcgaccaccgcctcagaacacttcgccggctcca
ccggccaagcaccaggcactgtctcaagaagaagattttgtcgatgaagatgttttcctc
gacgagaatcttctcgacgaggacgctctcatcctccgcgacattgaggagcgtcaggcc
ctcgcttctcgtctctctaaatggactcgtccacctctttcccaggagtacgtctcccag
tcgaagagcattgtgtttcagcaattggagattgattatgtgattggagaaagtcacaga
gaattgttgccgaatttgtctggccctgccgctattctaagaattttcggggttacgagg
gaaggacatagtgtttgctgccatgttcatggatttgaaccatacttctatatcagttgc
cctccaggaatgggtcctgatgatatctctctttttcaccaaacacttgaggctagaatg
aaggagatgaataggaacagtaaggcacctagttttgtgcgccgtattgaattggtgcaa
aagcgaagtattatgtactaccagcagcaaacttctcaatcctttcttaaaattgttgtt
gcactgccaacaatggtcgccagctgccgtggtattcttgacaggggcatacaaatcgat
ggctttggtatgaagagcttcatgacatatgaaagcaatgtgctatttgccctccgtttt
atgattgattgtaatgttgtgggtggaaactggattgaggttcctgtgggaaaatataag
aaaactgttagaaatttatcatattgccaattggagtttgattgcctatattcagacttg
atcagccatgcccccgaaggggaattttctaaaatggctccatttcggatattgagtttt
gatattgagtgtgcagggcgtaaaggccattttcctgagcctaccaaggatcctgtaatt
caggtggcaaacctagttactttgcagggagaggaccaaccatttattcgcaatgtcatg
acccttaactcttgctctcctattgcgggcgtcgatgtcttatcatttgatacagaacgt
gaagttttgctggcttggagggatctaattcgtgaagtagaccctgatataataattgga
tataacatctgcaaatttgatttgccatatctaatagagagagctgaggcactgaaaata
gcagaatttccaatattgggtcggatcaggaatagcaaagttcgtgttaaagatacaact
ttttcttcaagacagcttggaacaagggagagtaaagaaataacggtggaaggaagagtc
caatttgatttacttcaggcaatgcaacgagattataaattaagttcgtactcgttgaat
tctgtttcttcacatttcctttctgaacagaaagaggatgtccaccattcaataatatca
gatcttcaaaatggtaatgcagaaacacgtagacggctggctgtttattgtttaaaggat
gcatatcttccacaacggcttttagataaactgatgttcatttacaattatgtggagatg
gctcgagtaactggtgttcctatttcgtttcttctttcaagagggcaaagcatcaaggtg
ctctctcaactccttaggaaggcaaaacaaaagaacctcgttattccgaatgctaaacag
gcaggatctgatcaaggaacctatgagggtgctactgttttggaagcaagggctgggttc
tatgagaagcccattgctacgctggattttgcatctctgtatccatccatcatgatggca
tataatttatgttattgcactctggtgactccagaagacgttcgcaagctaaatctgccc
cctgaacatttcaataaaaccccatctggtgagatatttgtcaagccaaatctacagaag
gggatacttcctgaaatattagaggaattattgactgctcggaaaagagcaaaagcagat
ttgaaggaggcaaaggatccttttgagaaggctgtgttggatggtcgacagctagctctg
aagataagtgcaaattctgtgtatgggtttacaggagctactgttggtcagttaccgtgt
ctagagatatcatcaagtgttacaagctatggccgacaaatgattgagcacacaaagaaa
cttgtggaagataaatttacaactcttgggggctacgagcacaatgctgaggtaatctat
ggtgatacagattcagtaatggtacaatttggtgtgcccagtgtagaagcagcgatgatc
ttgggaagggaagcagctgattatatcagtggtactttcacaaaacccatcaagttagag
tttgagaaagtttattacccatatctgttgattagtaagaagagatacgctggtttattt
tggactaatccaaacaagtttgacaagatggataccaaaggcattgagacagttcgaagg
gataattgcttattggtgaaaaaccttgtaaatgagtgcttgcacagaattcttattgat
agagatgtccctggggcagttcaatatgtgaagaacacgatttcagatctacttatgaac
cgtgtggatttatctctcttggttatcactaagggactgacaaaaactggagatgattat
gaagtgaaggcagctcatgttgaacttgctgagcgcatgcgcaagcgagatgctgccact
gctccaaatgttggtgatcgagtaccttacgtgatcattaaagctgcaaaaggtgccaag
gcatatgagaaatcagaggatcccatttacgttctagagaatagcataccaatagaccct
cagtactatctcgagaatcagatgagcaagcctcttctacgaatttttgagcccatcttg
aaaaatgctagcaaggaacttctacatggaagccacacgagatcaatttttatttctact
ccttcaaacagtggcataatgaaatttgccaagaaacagcttacctgcattggctgtaag
gctctgctaagcaaggcagaccatactctctgcgcacactgcaaaggaagagaagctgaa
ctgtactgcaaagcggtagaaaatgtgtctgatttggagatggtttttggaagactttgg
acgcagtgccaagaatgccaagggtcccttcaccaagatgttctctgtacgagtcgagac
tgtccaatattttatcgaagaaagaaggcacaaaaagacatggctgaagctaaacagctt
ttggaacgttggaatttctaa
DBGET
integrated database retrieval system
