Cucurbita moschata (crookneck pumpkin): 111463619
Help
Entry
111463619 CDS
T05248
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111463619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111463619
03029 Mitochondrial biogenesis [BR:
cmos03029
]
111463619
Membrane trafficking [BR:
cmos04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111463619
Atg1 complex
111463619
Mitochondrial biogenesis [BR:
cmos03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111463619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111463619
NCBI-ProteinID:
XP_022963405
UniProt:
A0A6J1HHX1
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MISNSSHNTHSETAKVEQILTEFFPKTLQIILESRSPCSISSRNFSGEQVLSSPSSSSSS
SSSMRPRDKWFNLALRECSATLENIDLWRQSYHEPMVIDVVLVQRQFGLDSVDVSPRKDL
VRNLSTKEFGCQSMSEKVVERWMVHYESRKNRDSNSGSRRSSNSTAHTYKKTILLLRSLY
ALLRLLPAHKVFQDISSSSQIHPFTLSHRVSSFVEPFSRREEAEMQHFVFTPVDTSCGRL
CLSVLYRSSLSDITSEPSTPMSPQVIPEYVGSPLADPLKRFPTLPVTIATSHGSPSSLPF
SRRHSWSYDRCRPSPPISFSPSPTNSESHATISNPAFCRLPPSSLPSQMVMGHKDNMNYD
EYYRSPVFSPSPPIGIPVKRLPNGRLQSESAPQSAPTAKLPHSPALLSRPNLPPSPPLKA
FGPGIPRINRDVGPLQAGSAFGKSSSFGRDESRRISGWRVSSNNSPISRSPSTSFPDDLD
DPEFPCPFDDDNEMTDGGSRPESFDPKGSSNLCDMLEPSGFFPIRKSQDAAVGALVRMLQ
KATPLRQDFTNSSPNLSRPPTPGSSSSRNIQQQGTQICETIAPSKGRYAASSSITASKTT
ADALEELESYREMKNLVLKQGGKSPI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgaattcttctcacaatactcattccgaaactgccaaagtagagcaaatttta
actgaattcttccctaaaaccttacaaattatacttgaatccaggtccccttgtagtatt
tcatcgcgtaattttagtggcgaacaagttttgtcttccccatcttcctcttcctcctcc
tcctctagtatgaggccgagggataaatggttcaatctggcccttcgtgaatgctctgct
acgttagagaatattgatctctggcgtcagagctatcacgaacccatggtcatagatgtt
gttttggtccagagacaatttggtttggactcggttgatgtttctcctaggaaagatctt
gttaggaacttgtccacgaaggagtttggatgtcagtccatgagtgaaaaggttgtcgag
agatggatggtgcattatgaaagtaggaagaatcgggatagtaattcaggtagcagaagg
tcgagtaatagcactgctcatacctataagaaaaccattttactcttgagatctttatat
gcccttttgaggcttttacctgcacataaggtttttcaggatattagttcatctagtcaa
attcatccctttactctttctcatcgtgtgtcgtcctttgtcgagccgttctctcggaga
gaagaggctgaaatgcagcattttgtgttcactcctgtggatacttcttgtggtagactc
tgtctctcggtgttataccgttcgtcgctctctgatataacctctgaaccatcaactcca
atgtctcctcaagtaattcctgaatatgttgggagcccgttagccgatccattgaaaagg
tttccaacgctccctgtaacaatagcaacatctcatggatctccatcgtcattgccattc
tcaagacgacatagttggagttatgaccgatgtagaccctcccccccaatctcgttttct
ccttcaccaacgaattcggagtctcatgctacaatttcaaatccagccttttgtcgtttg
cctccttcaagcttgccttcacaaatggttatgggacataaagataatatgaattatgat
gaatattatcgttcccccgtcttttcgccctcaccacctattggcattcctgtaaagcga
ttaccaaacggtcgattgcaatctgaaagcgctcctcaaagtgcacctacagcaaagctt
ccccattcccctgcattgttaagcagaccgaatttgccaccatcgcctccccttaaagcg
tttggaccaggtattcctagaatcaatagagatgttggtccattgcaggcaggctctgca
tttggaaagtcatcgtctttcggaagagatgaaagccgaagaatttcgggctggagggta
tcctcgaataactcaccaatttctagaagtcccagtacatcttttccagatgatttagat
gatccagagtttccttgcccctttgatgatgataatgagatgacagatggaggtagcaga
cccgagtcgttcgaccctaaaggcagcagcaatctctgcgacatgctcgaacccagcgga
ttcttcccaatccgaaaatctcaagacgcagctgttggcgccctagtacgtatgcttcaa
aaggctacaccacttcgccaagacttcaccaattcaagcccgaatctctcacgacccccg
acacctggttcctcaagcagcagaaacatccagcagcagggaacccagatatgtgagacg
atagcgccttcaaagggtcggtacgccgcttcctccagcatcacagcctctaaaactaca
gctgatgcattggaagaactagagagctacagagagatgaagaatttggtgctgaagcaa
ggtggaaagagtcccatatga
DBGET
integrated database retrieval system
