Cucurbita moschata (crookneck pumpkin): 111463898
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Entry
111463898 CDS
T05248
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111463898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111463898
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111463898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
111463898
NCBI-ProteinID:
XP_022963620
UniProt:
A0A6J1HGK0
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN
VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGVRTGGRGRRKATGDENEGNASDRG
EEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
TAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD
GEEDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRK
NGEDVKPSSAPLKKMKTETESKPTDEALTTSRSTASKGAPVSVKTESASNSGPVTEEEIR
VVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggatttgatgctgaagccatcgtgcagtggatgcggatccacgacggagctg
tatgggagcaattgtaagcacatgacattgtgcttgtcctgtggcaaaactatggctgag
aacaagggaaaatgttatgactgtggcgctaccctaactcgcttaataagagaatacaat
gttcgatcaagtgcaagtagcgacaagaactactgcattggtaggttcatgagtgggctg
ccgaacttttcgaagaagaaaaatgctgagaataaatggtctctttacaaggaaggtcta
caaggacgccaccttacggatgcccttcgggaaaagtacaagaatagaccctgggtcttg
gaagatgaaacgggtcaatttcaattccaaggtcatcttgagggctcacaatcagcaaca
tattacttgcttgtattgcaaggaaaggaatttactgccattcctgctggttcttggtac
aacttcaacaaagtggcacagtataagcaacttactttggaggaggcagaagaaaaaatg
aagaatcgaaagaagacggcagatggatatgaaaggtggatgatgaaagctgcaaataat
ggtgctgctgcatttggtgaagttgagaagtttgatgacaaagaaggtgttcgcactggt
ggtaggggacggagaaaagctactggtgatgagaatgaaggtaatgcctcagatagggga
gaggaagatgaagaagaagaggcaacaaggaagaacagattgggactcaataaaaagggt
ggcggtgatgatgatgatgatgaaggtcctaggggaggtgaccatgacatggatgatgat
gatattgagaaaggagatgattgggagcatgaagagatttttactgatgacgatgaaact
actgctccggatcgtgaagaaagggaggatttagcccctgaagttcctgcacctccagaa
atcaagcaggatgacgaagacgaggaggatgaagaaaatgaaggggagggggggctgagc
aaatctgggaaagagttgaagaaattgcttaggcgcactggagggcttaatgattcagat
ggagaggaggacgacgacgacgacgatgaggaggatactggtgacactccagttttgcct
tcgaagcagaaggatacagttaaggaagaagctgcgtccagcagtccctcaaaaccaaca
ccttctggatctgctaagggaaccccctccactgcaaagacagcaaaaggaaaaagaaaa
aacggcgaggatgtgaaaccatccagtgcacctctgaagaaaatgaaaacagagacggaa
tcaaagcctacagatgaagccttgactacttctagaagtacagcctcaaaaggtgcacca
gtatccgtcaaaactgaatcagcatcgaattctggacccgttactgaggaagaaattaga
gttgtcttgcgccaaaggacacccgtaacgacgcaggatcttgttgcgaaattcaaggca
agactgcgatgtaaagaggacaagaatgcttttgcagagattcttaggagaatctcaagg
attcaaaagacgaacggaggaccaagttacgtcgtgttgagaaaacccgaagactag
DBGET
integrated database retrieval system
