Cucurbita moschata (crookneck pumpkin): 111463899
Help
Entry
111463899 CDS
T05248
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111463899
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111463899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
111463899
NCBI-ProteinID:
XP_022963622
UniProt:
A0A6J1HFR0
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MAVTLRLQFSTASLMLFLLLNILFVQSSFAGDQRLQSFNSSSMADRVDSFSGDERLQSFN
SSSMADRFAGDQRLQSFNSSSMADRYVKNEHAVDNPEEIASMVDLSIRNSTERRNLGFFS
CGTGNPIDDCWRCDPRWQLRRKRLANCGIGFGRNAVGGRDGRYYVVSDPRDDDPVNPRPG
TLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFITNVI
IHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCSDGLIDA
IMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYF
HVVNNDYTHWVMYAIGGSANPTINSQGNRYLAPVNPFAKEVTKRVVTSNGVWRHWNWRSE
GDLMLNGAYFTPSGAGAGASYARASSLGAKSSSLVGSLTSNAGALSCRRGFRC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcactcttagactacagttttcaaccgcttcattaatgctcttccttcttctc
aacatcctcttcgttcaatccagttttgctggagatcagcgattgcagagctttaattct
tcatccatggcggaccgtgttgatagtttttctggagatgagcgactgcagagcttcaat
tcttcatccatggcggaccgctttgctggagatcagcgattgcagagcttcaattcttca
tccatggcggaccggtatgttaagaatgagcatgccgttgataatccagaggaaattgca
tcaatggtggatttgagcatacgcaacagcacagagagaaggaacttggggttcttctct
tgtggaacaggaaatccaattgatgattgttggcgttgtgacccacgttggcaactgcgg
cgaaagcgcctcgccaattgcggcattgggtttggtcgtaatgcagtcggtggccgtgat
gggcgatactacgtcgtttctgatccacgtgacgacgatcctgtcaatcccagaccaggc
accctccgccatgctgtgattcaagacagaccattatggattgtgttcaaacgagacatg
gtgatcactttaaagcaagaactcatcatgaacagcttcaagacaattgatgggcgtggc
gtcaatgtccacatcgcttatggtgcttgtattacaatccaattcattaccaatgttatt
attcatggtttgcatattcatgactgcaagccaacggggaatgccatggttcgaagctcg
cctagtcattatggatggaggacaatggctgatggtgatgggatttcaatttttgggtcg
agtcatatttggattgaccataattctctttcttcttgttctgatgggctcattgatgct
atcatgggatcaactgctatcacaatttctaacaattacttcacccaccacaatgaggtg
atgctcttgggacatagtgactcttatgtaagagacaagcaaatgcaagtcaccattgct
tataaccattttggtgaaggtctcatccaaagaatgccaaggtgtagacatgggtatttc
catgtagtaaacaatgactacactcactgggtaatgtatgccattggtggaagtgctaat
cccaccattaatagccagggcaaccgatatcttgcccctgtcaacccttttgccaaagag
gtcacaaagagagttgtcacatctaacggtgtatggaggcactggaattggagatcggag
ggagatctcatgctaaatggagcctatttcactccatcaggggctggtgcaggagccagt
tatgcaagagcctcaagcttaggagccaaatcctcttcgttggtgggctcgcttacttca
aatgcaggtgccctttcttgtcgtaggggattccgttgttaa
DBGET
integrated database retrieval system
