KEGG   Cucurbita moschata (crookneck pumpkin): 111463920
Entry
111463920         CDS       T05248                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmos04121]
    111463920
Enzymes [BR:cmos01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111463920
Ubiquitin system [BR:cmos04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111463920
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX Prok-RING_4 zf-C3HC4_4 zf-RING_10 zf-rbx1 Zn_ribbon_6 zf-ANAPC11 zf-RING_4 Rtf2 zf-Nse Tudor_KDM3B Zn_ribbon_HMPTM Sina_RING TRAF3_RING zf-RING_11 Zn_ribbon_RlmA zf-P11
Other DBs
NCBI-GeneID: 111463920
NCBI-ProteinID: XP_022963653
UniProt: A0A6J1HFU4
LinkDB
Position
Unknown
AA seq 206 aa
MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFPEAQVNQQQSVQPAMID
IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV
NSDLLINLEGSNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ
SKCPTCRKRVTAKELIRVFLPGTSLE
NT seq 621 nt   +upstreamnt  +downstreamnt
atgagtactcaggcaatgagaggacatactgcaagaggttatcatcgtaggaaatcattg
gacttggacctaaacagcatgccaccaactgagaaccgagatcagggggagacatctcaa
tttggatttccggaagcacaagttaatcaacaacagtctgtacagcctgcaatgatcgac
attgaagccattgatgacgatgttattgaatcatccgctagagcttttgctgaagctaaa
aataaatccagacggaatgctaggaagaacatagttgatgtcgatgcagaagagcggagc
agggcgtcaaataataaccggagcaagcgtaggagggatgtgccgaatcaacaaactgta
aattctgatttattaatcaatttggaaggcagcaacagctctatgaaagagaaggctgct
ccaccgaaggagcccaatttcagttgtccaatatgcatgggtccgttggtagaagaaaca
tcaacaaggtgtggtcatattttctgcaaggcatgcatcaagactgcaatagccgtccag
agtaaatgcccaacctgtaggaaaagagtaactgccaaagaactgattagagtattcctt
cctgggacaagcttggagtga

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