Cucurbita moschata (crookneck pumpkin): 111463942
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Entry
111463942 CDS
T05248
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111463942
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111463942
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ET
Motif
Other DBs
NCBI-GeneID:
111463942
NCBI-ProteinID:
XP_022963687
UniProt:
A0A6J1HFX3
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All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MNNCIIKFSLSLLVILHVFLSLLLLFFNHASAAELTFNIITLGAKPDEKTDASPMLQTAW
AKVCDSSEPATIYVPEGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIQVLANSSSWIS
FNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIGARSLQINDGKNVNINGLSSINSQLFG
IVMNRCQNVHMSRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGPGTSNMW
IETITCGPGHGISIGSLGIEAEEDGVHNVTVKSSTFTGTQNGVRIKSWGRPSNGFATNVH
FQHITMDNVKNPIIIDQNYCPHLKDCPGQDSGVKVSEVTYEDIKGTSATEIAIKFDCSPT
NHCTGLNLIDINLTYENHIAKASCKNAEGTTSGVVEPSSCLAPANFYPYNIDPLGEVSLS
QATGYHGHACPWRVAYGRMSDVPIMLVHDAKACDSSEPANIYVLKDIFHVRSVSFNGPCK
NNVITVLIDGTLVASSDIQVLAKTKSWIEFSHISITGGIIDAPGTALWDCKRSGKICPTG
ATSLQINDAQNVNVNGLSSINSQKFNIVVDGCQNVHMTRVNVSATDDSPNTDGIHVQKSS
NVTTRALATVTTASQSVQGPPTCG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattgtatcattaagttttctttgtctcttcttgtaatcttacatgtttttctt
tccctgctacttttgttttttaaccatgcctcagccgctgaattaacattcaatattatt
actcttggagctaagcctgatgaaaagaccgatgcctcgcctatgcttcaaacggcatgg
gctaaggtctgtgactcatctgaaccagccactatttatgttcccgagggtatattcttc
gttcgaagtgtgagatttaatgggccttgtaagaacaatgctattactgttcttattgat
ggaactcttgtggcttcctcggacattcaagttttagctaattctagttcttggatttcg
tttaatcacataaatgggctttccattactggcggtattattgatgggcaaggaacaccc
ttgtggaattgtaaacactcacggaagagttgccccattggagccaggagtcttcaaata
aatgatggaaagaatgtgaacatcaatggattatcttcaattaacagccaattgttcggc
attgttatgaatcggtgccaaaacgtgcatatgagtagagtgaatgtcttggctgcgggc
gatagtccaaacactgatggcatccatgtgcaacaatcatctgatgtgaccatcctcaac
tcgaacattggaaacggtgacgactgcatctccatcggtccagggacatccaacatgtgg
atcgaaactattacatgtgggcctggacatggaatcagcattgggagcttagggatagag
gctgaggaggatggagtgcataacgttaccgtgaaatcatctacattcacggggactcag
aatggagtaaggattaagtcttggggaagaccaagcaatggattcgctacaaacgttcat
tttcaacacattactatggataatgtgaaaaacccaatcataatcgatcaaaattattgt
ccacatctcaaagattgtcctggtcaggattctggagttaaagttagcgaagtaacatac
gaagacatcaagggaacttcagccactgaaatagcaatcaagtttgattgtagtccaaca
aatcattgcactggattaaacttgatagacataaacctaacttatgagaatcacatcgct
aaagcttcatgtaaaaatgctgaaggaactacctctggtgtggttgaaccttctagttgt
ttagcacccgcaaacttttatccatataatatagaccctttaggcgaggtgagcttaagt
caagctacaggctatcacggtcatgcttgtccatggcgtgttgcctacggtcgcatgtca
gatgtccccatcatgcttgttcatgacgctaaggcatgtgactcgtctgaaccagccaat
atttacgttctcaaggatatatttcacgttcgaagtgtgagctttaatgggccttgtaag
aacaatgttattacggttctcattgatggaactcttgtagcttcctcagacattcaagtt
ttagctaaaactaaatcttggattgagtttagtcacatttccattactggtggtattatt
gatgcgccaggaactgccttatgggattgtaaacgctcagggaagatttgccctacggga
gccacgagtcttcaaataaatgatgcacaaaatgtgaacgtcaatggattatcttcaatt
aacagccaaaagttcaacattgtggtggatgggtgtcaaaacgtgcatatgacaagagtg
aatgtctcggctacagacgatagtccaaacactgatggcatccatgtgcaaaaatcatca
aatgtgacaactcgagcattagcaacggtgacgactgcctctcaatcagtccagggacct
ccaacttgtggatag
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