Cucurbita moschata (crookneck pumpkin): 111464314
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Entry
111464314 CDS
T05248
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111464314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111464314
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
111464314
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
111464314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
111464314
NCBI-ProteinID:
XP_022964231
UniProt:
A0A6J1HIC0
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MGRAEYSPLTAKQAVPKCHGVTQPISLAGPCDADVQRNKELEKFLVDSGLYESKEESAKR
EEVLCRIGQIVKDWVKQLTRIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGP
CYVNREEDFFYILHNILEELEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPE
DLDISDVSVLYNVDEQTVRSLNGCRVADQILKLVPNIENFRTALRCLKFWAKRRGVYSNV
TGFLGGVNLALLVARVCQLYPNAVPSMLLSRFFRVYTQWRWPNPVMLCAIEEDDLGCSVW
DPRKNHRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNRVCEEIELNKAQWSS
LFEPYLFFESYKNYLQVDIVAADADDLRTWKGWVESRLRQLTLKIERNTNGKLQCHPYPH
EYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSTVDDFKHNVNMYMFWKPGMEIFVS
HVHRRQIPLFVFPEGHRPRASRVSALQRSDGPNQEDVQNCRSGSGERYLKRKNDLNRIEG
EHGFPEKRRSISPRRQDSVSSNISQFSNSASSEHPEADVEAKTIDEKNRMCQTITRETEE
LTFGVSSIGSGSSRKESRSVESDKGCTKEKLESEKIPRIEIGHRCASNSSVITTLASESS
SCENVGFAAGSSEGNAGSIEGSADESNNPGTPVVDSCEADSELQLENSRVNGDIMHMEPK
PNAALELALNPGGGVKTETIPNSVIRLSMASTA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggtagagcagagtattcaccgttaactgcgaaacaagcggtgccgaagtgccatggt
gtgacacagccaatatcgttggcagggccctgtgacgctgacgtgcaaagaaacaaggag
ttggaaaagtttctggttgattctggcttgtacgaaagcaaagaggaatctgccaagaga
gaggaggttctttgccggataggacagattgtgaaagactgggtaaaacagcttactcgc
ataaaaggttatacagatcaaatggtggaggatgcaaatgctgtgatctttacttttggt
tcctatcgtctcggggtgcatggacctggagctgatatagacacgttatgtgttgggcca
tgctatgtgaacagggaggaggatttcttttatatattacacaatattttggaagaactg
gaagaagtgactgagttgcagccagttcctgatgctcatgtcccagtgatgaaattcaag
tttgatggaatatctattgacctactttatgctagtatatcttgtctggttgtgcctgaa
gatttggatatctctgacgtgtctgtcctgtataatgttgatgagcaaactgttagaagt
cttaatggttgtcgggttgctgatcaaattctaaagcttgttccaaatattgagaatttt
cgaacagcacttagatgcttgaagttttgggcaaaaaggcgtggtgtttattcaaatgtt
actggatttcttggtggggtaaacttggcacttcttgtggcacgggtttgtcagctttat
ccaaatgcagtaccaagtatgctgttgtctcgatttttcagagtctatacccagtggcgt
tggccaaaccctgtgatgttgtgtgcaattgaggaggatgatcttgggtgttctgtatgg
gatcctcgtaaaaatcatcgcgatagaactcatcatatgcctattataacacctgcatat
ccatgcatgaattctagctacaatgtttcaacaagtacactccgagttatgatggaacag
ttccagtttggtaacagagtttgtgaggaaattgagctgaataaagcacagtggagttct
ctttttgagccgtatttgttttttgaaagctacaaaaactatttgcaagttgatatagta
gcagctgatgctgatgacctacgcacttggaaaggatgggtagagtctcggcttaggcag
ttaacattgaagattgagaggaatactaacggaaagttacagtgtcatccttatccacat
gaatatgtcgacacatccaagccatgcgcccattgtgcgtttttcatgggtctgcagagg
aagcagggagagataattcaagaagggcagcagtttgatatacgttcaacagttgatgac
ttcaagcataatgtaaatatgtacatgttttggaagccaggaatggaaatctttgtttct
catgtccatagaaggcagatccctctttttgtgtttccagaaggtcatagacctcgtgct
tcaagggtatcagctttgcaacgttctgatggaccaaatcaagaagatgtacaaaattgt
aggagtggcagtggtgagagataccttaagagaaaaaatgatctcaatcgaattgaagga
gagcatggttttcctgaaaaacgacggtctattagtcctagaaggcaggattcagtttca
tccaacatcagtcaattttcaaatagtgcttcttctgagcatccggaagctgatgttgaa
gctaaaactattgatgagaagaatagaatgtgtcagacgatcactcgggaaactgaagag
ttgacttttggtgtctctagtattggtagtggttcttcaaggaaagaatctagaagtgta
gagagtgacaaagggtgtacaaaagagaaacttgagtcagaaaaaattcctcgtatcgaa
attggacatagatgtgcatctaattccagtgtgatcactaccttagcaagtgaaagtagt
tcctgcgagaatgtcgggttcgctgcgggtagtagtgaaggaaatgctgggagcatagaa
ggaagtgctgatgaaagtaacaatccagggacacctgtggttgattcgtgcgaggcagat
tctgaacttcagttggagaacagtcgtgtaaatggagatatcatgcatatggagccaaag
ccaaatgctgcgcttgagttggcattaaatcctggaggtggggttaaaacagaaaccatc
ccgaactcagtgataagattgagtatggcctcaacagcgtaa
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