Cucurbita moschata (crookneck pumpkin): 111464339
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Entry
111464339 CDS
T05248
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111464339
Membrane trafficking [BR:
cmos04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
111464339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
111464339
NCBI-ProteinID:
XP_022964270
UniProt:
A0A6J1HKC1
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MYMAYGWPQVIPLEPGLCPSSQQIIYLKVVNRLLLVVSPTHLELWSSAQHRIRLGKYKRD
SDSVQREGENMQAVWSPDTKLIAILTSSFFLLIFKVQFTDRKIHIGGKQPSGLFFATISL
VLSEQVPFAAKDLTVSNIVSDSKHMIIGLSSGSLYSISWKGEFYGAFHIDLHPHDHDEIG
IPSLSLDNGLAYKGSPRILKSNYDVSEKSAIIKLDLCLPLRMLLVLYADGKLVQCSVSKK
GLKYTDAIKAEKTFGSADAVCTSVASNQQILAVGTRRGVVELYDLADSASLFRSVSLHDW
GYSVEDTGYVSCIAWTPDNSAFAVGWKLRGLAVWSVSGCRLMSTIRQIGLSSVSSPMVKP
NQDCKYEPLISGTSVIQWDEYGYKLYAIEEKSSERILAFSFGKCCLNRGVSRTTHVRQVI
HGDDRMLIVQSEDSDELKMLNVNLPVSYISQNWPIQHVAASEDGMYLAVAGLHGLILYDI
RLKRWRVFGDITQEQKIQCEGLLWLGKIIAVCNYIEASNMYELLFFPRYHLDQSSLLCRK
LLLGKPVVMDVYQEYILVTYRPFDVHIFHLTLLGELTLSSTPELQLSTVRELSIMTAKSH
PVSMRFIPEQIPGEGISNNHISSSDMLVREPARCLILRANGELSLLDLDDGRERELTDSV
ELFWVTCGHSEEKTNLIEEVSWLDYGHRGMQVWYPSPGVDSFKQEDFLQLDPELEFDREV
YPLGLLPNAGVVVGVSQRMSFSASTEFPCFEPSPQAQTILHCLLRHLLQRDKSEEALRLA
QLSAEKPHFSHCLEWLLFTVFEAEISRQNVNKNQNMAAKYANNKQSLLEKTCELIKNFPE
YFDVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQ
YCALRLLQATLDESLYELAGELVRFLLRSGRDYDHASIETDKLSPRFLGYFLFRSSRNQT
LDKSSSSFKEPSAHVASVKNILEGHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYGS
ARLKDFASGLELIGEKLQMGTLQSRLDADFLLAHMCSVKFKEWIVVLATLLRRSEVLSDL
FRHDLRLWEAYKSTLQSSFAEYHDLLEDLNEKLLSTENLDEK
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcgtatggatggccgcaggtcatccctctggaacctggcctttgcccatct
tctcagcagatcatatatcttaaggtcgttaatcgcttactactcgtcgtctctcctact
catctcgagctatggagctcagcccagcacagaataagattgggaaagtacaagcgggat
tcggattcggtgcagagggaaggagagaatatgcaggccgtgtggagccctgataccaaa
ttgatcgccattcttacgtcatctttctttctcctcatctttaaggtccaattcactgat
agaaagatacatattggaggaaaacagccgtctggtttgttttttgccaccatctctttg
gttcttagcgagcaggtgccttttgcagcgaaggacttgacagttagcaacatagtaagt
gatagcaagcatatgattattgggctttccagtggatctttatacagtatatcctggaag
ggagagttctatggggcctttcacattgatcttcacccccatgatcatgatgaaattggc
ataccttctctttctctggataatggacttgcttataaaggttcaccaagaattctaaag
tccaattatgatgtcagcgaaaagtctgctatcataaagttagacctttgtcttcctctg
aggatgctccttgtgctatatgctgatggaaagttagtgcagtgttctgtaagcaagaaa
ggcttaaagtacaccgatgctattaaggctgaaaagacgtttggttccgcggatgctgtg
tgtacatctgtagcttcaaaccaacaaattcttgcagttggcaccagaagaggggttgtt
gaattatatgatctggcagattctgcctccctctttcgttctgtttctttgcatgactgg
ggatattctgtagaggacactggttatgttagttgcattgcttggacaccagataattct
gcctttgccgtcgggtggaaattaagaggattggctgtatggtctgtttctggttgccgt
ttgatgtcaactatccggcaaattggtttaagttctgtatcatctccaatggtaaagcca
aaccaagattgtaaatatgaacctttaattagcggtacctcagtgattcagtgggatgaa
tatggttataagctttatgccatcgaggaaaaatcttccgaaagaattcttgcattttct
tttggtaaatgttgccttaacagaggtgtttctcgcacaacacacgtacggcaagtcata
catggtgatgatcgaatgctcattgtgcaatcggaagacagtgacgaacttaaaatgctt
aacgttaatctcccagtctcttatatctctcaaaattggcctattcaacatgttgcagct
agcgaggatggaatgtatttagcagttgctggcctacatggtctaatcttatatgatatt
cggttgaaaaggtggcgtgtatttggggatattactcaagaacaaaaaatccagtgtgaa
ggtttattgtggttggggaagattatagcggtctgcaactacattgaagcttccaacatg
tatgagttactgttcttcccaaggtatcaccttgaccagagttctttactgtgtcggaaa
ctactgcttggcaaacctgtggtgatggatgtatatcaagaatatatattggtcacctat
cgcccatttgatgttcacattttccatttgacattacttggggaattgacattgtctagt
actccagaattacagctttctacagtaagagaactgtcaattatgactgcaaagagccat
ccagtatcaatgcgattcattcctgaacaaattccaggggaaggcatttcaaacaatcat
atctcttcttctgacatgttagttagagagcctgcaagatgtttgattttgagagcaaat
ggagagctttctcttctggatttggatgatgggcgagaaagggagcttaccgactcagtt
gaattattctgggtcacctgtggtcattcagaggagaaaacaaatttaattgaggaagtt
tcttggttagattatggtcatcggggaatgcaggtttggtacccttctccaggtgttgac
tcttttaagcaggaggatttcttgcagttggatccggagttggaatttgatcgggaggta
tacccacttggacttctcccaaatgctggtgtcgttgtaggtgtttctcaaagaatgtca
ttttctgcaagcacagaatttccatgttttgagccatcacctcaagctcagaccatactt
cactgcctattacggcaccttctacagagggacaaaagtgaggaagctctgagattggca
cagttatcagcagagaagcctcatttttctcattgtttagaatggcttctttttaccgtt
tttgaagctgaaatatccaggcaaaatgtgaacaagaaccagaatatggctgctaaatat
gctaacaacaagcaatcacttttggagaagacatgtgaactgataaagaatttccccgag
tattttgatgtagttgtaagtgttgcaagaaaaactgatggtcgacattgggctgacttg
ttctctgccgctggaagatcaacagagttgtttgaggaatgcttccaacggaggtggtac
cgtactgcagcctgctacatacttgtgattgcaaaacttgaaggtcctgctgttagtcag
tactgtgctttacgccttttgcaggcaacactagacgagtccttgtatgaacttgctgga
gagctggtgaggtttctgctgagatctggaagagactacgatcatgcatcaattgagaca
gacaaactatcacctcgattcttgggctattttctttttcgttctagcaggaatcaaaca
ttggataaaagcagctcatcattcaaggagccgagcgcacatgttgcttctgtcaaaaac
attttggaaggccatgctagttatttgatgtctgggaaggaactatcaaagcttgtagca
tttgtcaaaggaacgcagtttgatttagtggaatatctccaaagggagagatatggaagt
gctcgtttgaaggattttgcatcagggcttgaactaattggggagaagcttcaaatggga
acacttcaaagccggttggatgcagatttcctcttggctcatatgtgctctgttaagttc
aaggaatggattgttgttttagccactcttctaagacggtctgaagttctgtctgatcta
tttaggcatgatctgcggttgtgggaagcatataagagcaccctacagtcatcctttgcc
gagtatcatgatctgcttgaagacttgaacgagaaacttctatcaacggaaaacttggat
gagaaatag
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