Cucurbita moschata (crookneck pumpkin): 111464403
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Entry
111464403 CDS
T05248
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmos03009
]
111464403
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111464403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
HEAT_GCN1
DUF7194
Motif
Other DBs
NCBI-GeneID:
111464403
NCBI-ProteinID:
XP_022964369
UniProt:
A0A6J1HMY3
LinkDB
All DBs
Position
Unknown
AA seq
2668 aa
AA seq
DB search
MATASHAVAVKSLNKSPGRRRFVFQTFSQRLQEIDIDVYRSLDKVKSEPSEGSSFFRDCL
MEWRELNTAEDFISCYEEIIPLAQTLPLVILHKESIFSNLLSRVHIKGRLSLEPILRLIA
ALTRDLLEDFLPFLSPLTDALVSLLEGGAAREPEIVEQIFTSWSYIMMHLQKYLTRNLVH
LLKVTVPLRHYPKEYIQDFMAEATSFLLRNAPVDQLKNGIKQIILEVVKKPLATREYGAS
ALLFHTMRGTSSRFHSRAELVFRFLISGPTFESGLDSSQGSDAILEVIKCVCQRLCEEME
PKELDMIWKCLIEEIMDAITNGYVLRINQLLMLLTSAVQNVNWKQISDYKPMLELVDLHM
MKFITTTSLTMEDGLSKIIDSILQLMLVILDGLLSSEDSLSISNCSLHWAPIFQLNSSCL
LTFVREVMGKDTSVLCAFRTNILRTMNELLESFREEVVYLLLSFCERLPTKVLCTSEEEV
PRILNFFQKILGHWIKEIADFMQGSSNDIDESELAIFWGVIRCCPYILNFQANSSLLVDL
IDALDRLCTVEGNIFGVPKENWESLIGATIGSYLKLLSHEKAGLEESKRLVYLAKRYSSC
SQVLVAVADYLEFIHGPALEVDVSKRIYSEEFQADKVEDAVQVFADNLRHPDKVVRMSTL
RILCHYEPLRSGILIKDPATDNEMETENLESCSDDSVGSEVLRLLLSIESTPTSISTSRK
IILLISRVQMVLLSEKIPEAYLLVALNGIIGIFQNRFSYIWDQASECLASLIRRHSRVVW
DKLICYFQQWLFLLDQPDRETVESSDELHDLVRCFRSFVVPSPDSTPLYTLLSLVLQSLQ
KNSTIVESQSRQILPLFFTFLGYNTDNVESVYSFKQYTCKSKEWKCVLKDWLNLLRNTRN
LKSFYKSDFLKEVLEQRLLDDNDAEIQSKVLDCLLIWKDDFLIPYEHHLKNLISPKTLRE
ELTRWSLSKEKNQIDDRHRPNLLPVVTRLLMPKVRKLKVLGSRKQASVNLRKAVLQFFAQ
LDTTELPLFFALLLKPLNIIPKEADASAYSRPVSMNTSATNILKYFSAESIVALSWKKKF
GFMHVIEEVLAVFDEMLVSPFLNMILGCVVRVLGSCTSSLHAARKNEESLVENEKMCDKN
SLEINKETASPGLTSTAVKQYKDLRSLCLKVISFVLYKYEDYDFEIEFWGLFFMSVKSSI
ESFKHEGSSSEKPSSLFSCFLAMSRSHKLMPLLSRERNLVPDIFSILTISTASQSIISFV
LQFIENLLTYDGELDDNDSTVRSVLLPNLDSLVQNLHVLFQSGDAKKRKLVEHLNGPMIR
IFKLLSKLVRDPLHAKMFVEILLPYLTQSRHTSGSHADTLQVIQNVVPILGSESTTKILK
AVSPLLISVEQDLRLLICDLIHALAEVDSSILCVAQIIRGLNATSAMDIGGLDFDTIVNS
YEKINVDFFCSTSVEHALVVLSQCVHDMSSEELILRHSAYRSLLSFVEFSSSILGQGGMG
HHESIDNTTLPDNSWLKVNIMQITNKFILKHMGQAMNRETSIKKEWMNLLREMVLKFPDV
ANLCSLKALYSKDAEVDFFSNITHLQKLRRAKALIRFKNTISTVNIPEVITKNVFVPLFF
NMLFDLQEGKTENIRVACIEAIASISGQMEWKSYFALLRRCFRDLTKRPDQKKVLLRLIC
SILDNFHFQENTSVVGSTRLCGSTVVTSDMQACLSKYVFPKIQKFMNSQSERVDIYVHLA
ALKVLKLLPEDVMDSQLLSIIHHIVNFLKNRLESVREEARSALAACLKELGSEYLQVIVR
VLRGSLKRGYELHVLGYTLNFILTKFFTAPAFGKMDYLLDDLISIVEKDILGEVSEEKEV
EKLASKMKETRKQKSFETLKLIAQSVTFKSHALKLLRPVTDHMKKHLTPKVKAKLENMLT
NIAAGFESNPSVNQTDLLVFIYGLIEDGIKVENGQGESTSLLDANKRSKDVSRGKNLSCQ
IILAKSPCSHLIMVFALKLLHGYMKKMQLGKEHVPLLSMLDPFISLLGNCLTSRYEDVLS
LTLRCLTPLLRLPLPSVKSQADKIKGVVLNIAQSSVDPCNPLVESCLRSLTVLLRNEQVT
LSTDQLHLVIQFPLFVDIHKNPSFVALSLLKAIVSCKLVVPEIYDLAIRVAELMVTSQVE
PIRKKCSKILLQFLLDYRLSEKRLQQHLDFLLSNLRYEHSTGREAVLEMLFTIVVKFPRT
VVDSISQTLFVHLVACLANDQDNNVRSMTGAVIKRLIGCISSGPLHSILDYSLSWYLGGK
QQLWSAAAQVLGLLVETVKKGFERHIRTVLPVARGILQSVVDVTTNDQIDISAETTTTFW
KEAYYSLVMLEKMMHQFPELFFDKDFEDIWEMISHLLLYPHMWIRSISNRLIASYFTTVI
ENSRRNSEKSLGDYSLMKPSRLFLIATSLCCQLKSDLTDKDADLIVQNLVFAICGLHSVI
GKVESTNSCPFWSTLEQPEQRLFLKAFQLLDSGKGRSMLLPRMTGVFDQDDACPNICYLL
VSNLLKQMGKVALQTDTIQMTIVFNVFRNISSQIAVEDCERYAFEILLPLYRVREGFSGK
LITDSMVQLAQEVCDKIQNCLGIQKFVQVYSQIKKRLKVKRDKRRQEEKRMAVVNPMRNA
KRKLRIAEKQRASKRRKIATMRMSRRMM
NT seq
8007 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcttctcacgcagtagctgtcaagtccctcaataagtcccctggtcgccgg
cgttttgttttccagacattctctcagagattacaagaaattgacatcgatgtatacaga
agcctcgataaagtaaagtccgagccatccgagggatcctcctttttccgggactgtctt
atggaatggagggaattaaataccgcagaggattttatttcttgttacgaagaaatcatt
cctctggcacaaacattacctctggtgatactgcacaaggagtccatattttcaaatctt
ctttctagagtacatataaaagggaggctatctctggagcctatattgaggttgattgca
gctttaacgagagatctgttggaggattttttgccattcctgtctccattaactgatgca
ttagtgtctctcctagaaggtggtgcagcaagggagccagaaattgttgagcagattttt
acatcttggtcatatattatgatgcacttgcaaaaatatcttacgcgaaatcttgtccat
ttgctaaaggttactgtgccattaagacattaccccaaagagtacattcaagatttcatg
gctgaggcgacatcatttttgctgcggaatgcaccagttgatcagctaaaaaatggaatt
aaacagataatattggaagttgttaaaaaacctttagcaactagagaatatggtgctagt
gctctgctatttcacacaatgagaggaacctcatcaaggtttcattcaagagcagagctg
gtgtttcgctttttgatcagtggtccaacatttgaaagtggcctagactctagccaaggt
tcagacgctattctagaagtgatcaagtgtgtgtgtcagagattatgtgaagaaatggaa
cccaaggaattggatatgatatggaaatgcttgattgaagaaataatggatgccattaca
aatggttacgtgcttcgaataaatcaacttttgatgctgcttacttcagcagttcagaat
gtgaattggaaacaaatttctgattacaaaccgatgcttgagcttgtagatttacacatg
atgaaatttatcacaactacaagccttacaatggaagatggcttatccaaaatcatagat
tcgattctgcaattaatgttggttattcttgatggtcttctaagttctgaggactctcta
tctatttctaattgttcgttgcactgggctccaatatttcaattaaatagcagttgttta
ttgacttttgtacgagaagtaatggggaaggacactagtgtactatgtgcattcagaact
aacatcttaagaacaatgaatgaattgttagaatctttccgtgaagaggttgtctatctt
cttctttccttctgcgagagattaccaacaaaagtgttatgtacatccgaagaggaggtt
ccaaggattttgaactttttccaaaagattcttggtcattggattaaagagatagctgat
ttcatgcaaggcagttctaatgatattgatgaatctgagttggctattttttggggtgtt
attcgttgttgtccatatattctaaactttcaagccaattcatccttactagtggacttg
attgacgcacttgatcggctttgtacagttgaaggtaacatatttggtgttcctaaagaa
aattgggaaagcttaattggtgcgactataggttcttaccttaagttgctttcccatgag
aaggctgggcttgaagaatcaaaaaggcttgtgtaccttgcaaaaagatatagctcatgt
tcacaagttttggtagctgtagctgattatttggaatttattcatgggccagcattggaa
gttgacgttagcaaaagaatttattcagaagagtttcaagcagataaagttgaggatgca
gtacaagtgtttgcagataatctgcgtcacccagataaggttgttcgtatgtctactctc
agaatcttgtgtcactatgagcctttgcggtctggaatccttataaaggaccctgcaact
gataacgagatggaaactgaaaatttggaatcatgctccgatgattcggttggcagtgag
gttcttcggctgctcctttctattgaatcgactcctacttcaatatctacgagcagaaag
attatattattaatctctagagttcagatggtcttgttgtctgaaaagattcctgaggct
tacttattggttgctttgaatggtattattggcattttccaaaaccgctttagctatatt
tgggatcaagcatctgaatgtcttgcatctttaatcagaagacactcaagagttgtgtgg
gataaattaatctgttattttcagcagtggttatttctacttgatcaaccggacagagaa
accgttgaatcatctgatgaactacatgatctagtcagatgtttccgctcatttgttgtt
ccttcaccagacagtacaccactctatactctgctatccttggtgctccaatcattacaa
aaaaattcgactattgttgaatctcagtctcgtcagattttgcctctgttcttcacattt
ttaggctacaacactgataatgtggaaagtgtgtattcattcaaacaatatacatgtaaa
agcaaggagtggaaatgtgtgctcaaggattggttaaacttgctgagaaatacccgtaac
ctgaagtcattttacaagagtgattttcttaaagaagttttggagcaaaggcttttggat
gataatgatgctgaaatacaaagcaaggtccttgattgcctcttaatctggaaagatgac
tttttgattccatatgaacatcacctaaaaaacttgatctcccccaagactttgagagaa
gaacttacaaggtggagcttgtcaaaagaaaaaaatcaaattgatgatcggcatagacct
aatctcttacctgtagttactcgcttattgatgccaaaagtcagaaaattgaaggttctt
ggttcccgcaagcaagccagtgtaaatcttcgaaaagctgtccttcagttctttgcacaa
cttgataccacagagcttcctcttttttttgctctgctattgaagcccttgaacattatt
ccaaaggaggctgatgctagtgcttactcacgcccagtttcaatgaatacttcagcaact
aacatcttgaaatacttctcagcagaaagtatagtagcattgtcatggaagaagaaattt
ggttttatgcatgttattgaagaagttcttgcagtttttgatgaaatgcttgttagtcca
tttctcaatatgatattgggttgtgttgtccgagtattgggaagttgcacatcaagtctt
cacgcggcaaggaaaaatgaagagtctttagttgaaaatgaaaagatgtgtgacaagaat
tcacttgagatcaacaaagaaaccgcatcccctggcctgaccagtacagccgtgaagcag
tataaagatttaaggtctttgtgtctcaaagtcatttctttcgttctctacaaatacgag
gattacgattttgaaattgagttctggggcctattttttatgtctgtgaaatcttcaatc
gaaagtttcaagcatgagggctcaagtagtgaaaagccaagttcacttttctcttgcttt
cttgccatgagtagaagccacaaacttatgccactattgtctagggagaggaatcttgtt
cctgatattttttcaatcctcaccatctcaacagcatctcaatccatcatatcgtttgtt
cttcagtttattgaaaacctattgacatatgatggtgagttggatgacaatgacagtact
gtcagaagcgttctacttccaaatcttgattcactcgttcaaaacttgcatgttcttttc
caaagtggtgatgctaaaaagaggaaattggtagaacacctcaatggaccaatgataaga
attttcaaattactctcgaagcttgtaagggatccactgcatgctaagatgtttgttgaa
atcttactcccatacttaactcagagtagacatacttctggatctcatgccgatactctg
caagtaattcagaatgtggttcccatactagggagcgagagtacaacaaaaatcttgaaa
gcagtttctccgttactgatttcagttgagcaagatttgcgtttgcttatatgtgatctt
atccatgctcttgcagaagttgattcttccatcctctgtgtggctcaaatcatccgtggt
ttgaatgcaacctctgctatggacattggtggccttgattttgacacgattgtcaatagt
tatgaaaaaattaatgtggatttcttctgttctacctcagtggaacacgctttagttgtt
ctatcacagtgcgtgcatgatatgtcgtcagaagaactaattctaagacatagtgcttat
aggtctttgctctcttttgttgaattttcttcttcaattcttggtcaaggagggatgggt
caccatgaatcaattgataatacgacattacccgacaatagctggttgaaagtaaacatc
atgcagataacaaacaaattcattttgaagcatatggggcaagcaatgaacagagagacc
tctattaaaaaggagtggatgaatttattgcgagaaatggtgttgaaattccctgatgtg
gctaatttatgttcgctgaaggccttatacagtaaagatgctgaagttgattttttcagt
aacataacccacttgcagaaacttagaagagcaaaggcactgattcgcttcaaaaatact
atcagtaccgtcaacattcctgaggtcatcacaaagaatgtctttgtgccgctgttcttc
aatatgctgtttgatttacaagagggaaaaacagagaatattagagttgcttgtatagag
gcaattgcttcaatttctggtcaaatggaatggaagtcatattttgctctgttaagaaga
tgttttcgggatctcactaaacgcccagatcagaaaaaggttctgttgcgcttgatatgt
tctattttggacaacttccattttcaagagaatacttcagtagttgggtcaacacgcttg
tgtggcagtacggttgtgacaagcgatatgcaagcatgccttagtaaatatgtgttccca
aagatacaaaaatttatgaactctcagtcagaaagggttgatatttatgttcatcttgct
gcactaaaggtgttaaaattacttccagaagatgttatggattcacaacttttgagcatc
atccatcatattgttaactttttgaagaatcgtttagaaagtgtccgtgaagaagctaga
tctgcattggctgcttgtttgaaggaacttggatctgaatatttgcaagttatagttagg
gttttgagaggatctctaaagcgtggatacgagctgcatgtgctggggtatacactcaat
tttatattgactaagttctttactgccccagcttttgggaagatggattatcttttggac
gatctcatttctattgtagagaaagatatccttggagaggtctccgaggaaaaggaggtt
gaaaagttggcctcaaaaatgaaagagacaaggaaacagaagtcctttgagacactgaaa
ttgatagctcaaagcgtaacatttaaaagccacgcacttaagcttcttagacccgttact
gatcatatgaagaagcatctgacaccaaaagttaaagccaaattggaaaatatgctaaca
aacatagctgctggttttgaaagcaatccttctgtcaaccaaactgatcttttagtcttc
atctatggcctcattgaagatggaataaaagttgaaaatggacagggtgaaagcacttcg
ttgcttgatgcaaacaaacgttctaaagatgtctccagaggaaaaaatttgtcatgtcag
ataatacttgctaagtccccctgttcacaccttattatggtgtttgcacttaagcttctg
catgggtacatgaagaagatgcaacttggaaaagaacacgttccgttgctatcaatgctt
gacccttttatttccctgttaggaaactgcttgacttctagatacgaggatgttttatca
ttaactcttagatgtctcactccattgctgagattgcctttgccatctgtcaaatcccaa
gctgataagatcaagggagtagtgttaaatattgctcagagttcagtagatccatgcaat
ccattagtagaatcatgtttgaggtcattaactgtgcttctgcgaaatgaacaagttaca
ctttccacagatcagctgcatttagtaattcaatttccattgtttgtcgatattcacaag
aatccatcttttgttgccctttcacttctaaaggcaattgttagttgcaaacttgttgtc
cctgagatttatgatcttgctattcgggtagctgaattgatggtgacaagtcaagttgaa
ccaatacggaaaaaatgcagcaaaatcttactacaatttctgcttgattaccgtctttca
gaaaagcgcttgcagcaacatttagattttttgctctccaatttaaggtatgagcattca
acgggaagagaagctgttttggagatgcttttcacaattgtcgttaaatttccaagaact
gtggtggatagtatttctcagacattatttgttcatttggtggcttgcttggctaatgat
caggataataatgttcggtctatgactggtgctgtaattaagcgcctaataggttgcata
agttctggtcctctccattctatacttgattacagtctatcttggtacttgggaggaaag
cagcaactatggagtgccgcagcacaggtcttgggattattagttgaaactgtaaaaaag
ggttttgaaagacatataagaactgtgttgccagttgccagaggcattctgcagtctgtt
gttgatgttactacgaatgatcaaatagacatttctgcagaaacaaccactacattttgg
aaggaggcatattattcgttggtgatgctagagaagatgatgcaccaattcccggagtta
ttctttgataaggattttgaggatatatgggaaatgattagtcatctgcttttgtaccca
catatgtggatacgtagcatctcaaatcgcttgatagcgtcatatttcactactgtgatc
gagaatagcagaagaaattctgaaaaatcgctaggagattattctcttatgaagccaagt
agactcttcttaattgctacttccctttgctgccagttgaagtcggacctcacagataaa
gatgctgatttgattgtccaaaaccttgtttttgctatttgtggtttgcattctgtgatt
ggaaaagtggagagtacgaattcatgtccgttctggtctacgcttgaacaacccgagcaa
aggctttttctcaaagcattccagttgcttgactcaggaaaaggaagaagcatgctttta
cctcgaatgactggtgtattcgaccaagatgatgcttgtcccaatatctgttaccttctc
gtctcgaacttgctcaagcagatggggaaggttgctcttcaaacagatactatccagatg
actatcgttttcaatgtcttccgcaatatatcatcacaaatcgctgtagaagattgcgaa
cgatatgctttcgaaattttgctgcctttatatagagttcgtgaagggttttccggaaag
ctaattactgattcaatggtacagttggcccaagaagtttgtgataaaatacagaattgt
ttgggcattcagaaatttgtacaggtgtacagccagatcaagaagcgtctcaaggtcaaa
agggacaagaggaggcaagaagagaagcgcatggcggtcgttaatcctatgcgaaacgcg
aaaaggaaactacgaattgcagaaaaacaacgtgccagcaagagaaggaagatagcaacg
atgagaatgtcgaggcggatgatgtag
DBGET
integrated database retrieval system
