Cucurbita moschata (crookneck pumpkin): 111464485
Help
Entry
111464485 CDS
T05248
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111464485
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111464485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
111464485
NCBI-ProteinID:
XP_022964472
UniProt:
A0A6J1HHW8
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV
KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
KEPLECYFMSDIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL
NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC
IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMYLCDNHSYF
SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ
YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDLTDE
SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSETSGKSD
SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL
FD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggagttggaggcaatttctgggatttactgaaacctcatgctcgaactgagggcttc
gatttccttaggaacaaacgggtcgccgtcgacctctctttctggatcgtccagcacgag
accgccattaaagccagtgttcgaagccctcatttgaggctcacattcttccgcaccatc
actctcttcgctaagtttggtgcgtttcctgtgtttgtaattgatggaactccttcaccc
ttgaaatccaaggcaaggatagcaagattttttcggctatctggtattgatactcatgat
ctgccaagggttgaagatcgcatttcagttgacaggaatagcaagtttgcaaaatgtgtt
aaagaatgtgtggaactgcttgagctatttggggtgcccgtcttagaagcgaaaggagaa
gccgaagctctgtgtgccgagttgaatagaaaaggatttgtggatgcctgcatcacagct
gacagtgatgcttttctgtttggcgccaaatgtgtcattaaaagcttccatcccaattca
aaagaaccacttgaatgctacttcatgtcagatattgaagctgctcttgggttaaaaagg
aaacacttgatagctatctctctcctggttggaaatgaccacgacttaaatggcgtgcaa
ggagttggactggataccgctgttcgttttgtacaagattataccgatgatgacatttta
aacaaattgcatgaaataggaaaggaggataatacgagtcttcagggtggacaatcttcg
gatacgaactcgagaaaggttaagtgttctcactgttccttctgtggtcatccaggcagc
aaaagagaccatgttaagatcccttgtgaatactgtgatgtgagtcatggaagttgttgc
atcaaaaaacctgatggatttaaatgcaattgttcctcttgtgatacggatcgagaagag
aaagagaaaaagaagcaagaaaattggcgactacgagtttgcaacaagattgctatggag
cccaactttcccagtagtgaacttattcaaatgtatctgtgtgacaatcatagttatttt
agtgatgatgaccttatcttatcttgggaaagcccgaaaactgaaattctgattgatttt
ttagtttttcatttacggtgggagccatcttacattcgtcagaggttgcttcccatgcta
tccaccatttttctcagagaaatggctaataatccaattcaaactttgttatacgaccag
tacgagttcgattctatacttagagaaaaaataagatatggacatccattttatgtagtc
aaatggaaaagggccatcccggtgctcgacaatgttgtatacgaaggctcttcggaggga
ctcggcaccgggccagaagatgccattgatgtcgatgaaccagtggatctaacagatgaa
tctgattcacccaaaattcatattcaagaagggtgctcgtttctattgaccgatgagaat
atggaccttgttcgagctgcttatcccgaacaaactgctaagtttttgcaggaaaaggaa
gtgaaaaggcagaagacaccaaccacgacgccacctagcgagactagcggaaagtccgat
tcattgaaagcgaaaggtgcccagttaagtattactgagttctaccgtgcaacgaaaacg
caacaacaaacagcagagacaacagatttgacgaatgagggcgaggagacgagcacggaa
aagaggaaagcatcaagttcttcttcgacactttcgaagtcggtaaggcgtcgccttttg
tttgactag
DBGET
integrated database retrieval system
