Cucurbita moschata (crookneck pumpkin): 111464569
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Entry
111464569 CDS
T05248
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111464569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmos03009
]
111464569
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111464569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WDR55
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
111464569
NCBI-ProteinID:
XP_022964606
UniProt:
A0A6J1HJF3
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MKMEQHKSPPITAFTPNGDYLAILSSNGTVKIWNTSDGSLLAEWKDPDGKTDAGYSCIAC
CFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGCHLGGVIGLSFADKGRRLHTV
GSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVH
PDKLGPVKLDSISDDAKTIITSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRN
INNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSP
KSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDE
NHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVL
KLLHALISIIQSRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQ
SALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMETDEEGGGVEVEA
FDDLSAGEVDDDMSE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggagcagcataaatcgccgccaatcacagcgttcactcccaacggcgactat
ctagctatcttgtcctccaatggaactgtcaagatttggaatactagcgatgggagtttg
ctagcggagtggaaggatcctgatgggaaaactgatgctggttattcttgtattgcctgc
tgttttgtggggaaaaaacgtaaaaacagttcttgtcttattgctatcggtaccaacgga
ggggatgtgttgacagtaaatgcttcgagcggtgaaacgaagtgggtctctgccggttgc
catcttggtggagttattggcctttcttttgcggacaaaggccgtagactgcataccgtt
ggaagtaacggaattgcattcaagatgaacgccgaaacaggaagcattatcaatgagttc
aaagcttcgaaaaaatcaatctcttcttcagccttttcacttgatgagaagtacttagct
gtagctggcaaaaagttgaagattttaagcacagatgatggggttgagcttatggtgcac
cctgataaattgggtcctgtgaagcttgattctatatctgatgacgctaaaacaataatt
acatcagaacctggagccaaacatattcaagtgtggtggtgtgatatgagtgctggaaaa
cttagtcgaggtcctgttctgtccatgaagcatcctccgtttgtttctgaatgcagaaat
attaacaatggggaagatagcatagttgtcttgtcagtatcagtatcaggtgtagcttat
ttatggaaattaaagttcctatcagaagacaaggttaatccgactaaagtcactgttaaa
gttaacaacgtcgaatcagctgaggaaaaccatggaagtgctaagaagaatcgtatttct
gtcctctcttccacaatacaaggtttaggagacaatgaagtgtcagtccttgtcactcat
ggctccatggacctaccgcagcatactgtccttaatatcggttatcctgcaaaggaagac
gcaaatatcgcacttgagaaagaaggtccccacgagatcaaacaagcagttacttcgcct
aaaagtaagaaaagcaaaaagaagagagctgcatctgatctcgacagtcagaaagctgga
gatgtcagtgatgtcggcaacgaagatatgtctaacgttctatttaatgatgatttaaac
gagccaaccatgggagataaacttgcgagtttgaatttagaggaacagaacgaagacgag
aaccatgaacaagatgaaccttccgtccctgctatcccaccaagtgcagactctgttcag
gttttgctcaagcaagcactacgtgcagacgatcgtgcccttttgctagaatgcttatac
accaaggatgataaggtcatctcaaaatcaatagcacaactaaattcttcagatgttctc
aagcttttgcacgctctcatatccattatccagtcaagaggggcaattcttgtatgcgcc
atcccttggctgagaggtttacttcttcaacatgccagtagaataatgtctcaagaatct
tctctactcgccttgaattctctatatcagctcattgagtctagaatttcaactttccaa
tctgctcttctgctatcaagtagcttagacttcctttacacaggggtccttgatgaggag
gcggaagaaaatgatgccattgtaccgattatttacgaggaggacgatagcgatgataag
gaatcgtcgggagatgaaatggaaaccgatgaagagggtggaggagttgaagtagaagcc
tttgacgatcttagtgctggtgaagtggatgatgatatgagtgaatga
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