Cucurbita moschata (crookneck pumpkin): 111464695
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Entry
111464695 CDS
T05248
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111464695
03015 mRNA surveillance pathway
111464695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111464695
03041 Spliceosome [BR:
cmos03041
]
111464695
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111464695
Spliceosome [BR:
cmos03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111464695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
111464695
NCBI-ProteinID:
XP_022964685
UniProt:
A0A6J1HLI6
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MSGGFFRGTSTDQDTRFSNKQAKLLKSQKFPAELDQLVDTTKVKMDVIKPWIATRATELL
GFEDEVLINFIYGLLDSKEVNGKEVQIQLTGFMEKSTVKFMKELWTLLLSAQTNASGVPQ
QFLDAKEEEIRKKKAETDFLANEIQKKREKENKEMEEQRSKNMDDGAEKVANFVLEPTSM
NRPEDEEEAEKSNGVRGRSSDGHKSRSMSRSPQRLRDSFSQERLSISPRRRDHRDSSSPR
HRSSDSRRSRSTSNRKSLSPVVHQLRSPSQHSSPSPHCRSPHQLSSSGQRRSSSPAQRRS
PSLDKHNRSPSPSEHCRSLSPIRHSRLPSPARHRRSQSPEWHRRSPSPEWRRRSPSPKWS
CRSPSPRQRRRSPSPRRRRRSPSPRRHRRSPSPRRRRRSPSPRRRRRSPSPRRRRRSPSP
RRRHRSPSPVRRRRSPTPIRRRRSPTPVRRRWSPSPIRSRRSPSSPRHYRSPSPHRRKSP
SLVRRHRSPSPAHYRRSPSPIKHHPSRSPGQRSMSPSSSPIQKFDRPSPHPLERRSPSSP
ARLKRSSLSQHRSISPYDQNYSSKERGNRSPVKVKSPRVRTSDERSYSRRGKAKETEART
VENNKGRKRHRRSDRSDTSSERRHRRLDRRDTYSERRHRRSDRRVTSSEDSYDSELERKE
ARRRKEEEEERRCWKEKKRQRREEHGRKKGKRRAEKTKAKTLSDDCSDDGRAVREVCRPS
DGAYEAEQRRLEVELRNKALEAFIARKGRRHNKSSE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgggtttttccggggtacgtctacggaccaagacactcgtttttcaaacaag
caagcaaagctgctgaagtcacagaagttccctgctgaactagaccaactggttgatacg
acaaaggtgaagatggacgttatcaagccgtggattgctacgagggcgacggagcttctt
gggtttgaagatgaagttcttattaacttcatatatggccttttggatagcaaggaagtg
aatgggaaggaagttcaaatacaactcactgggttcatggaaaagagtactgtgaagttc
atgaaagagctttggacactacttctaagtgcccagacgaatgccagtggtgtacctcaa
caatttttggatgccaaggaagaagaaattaggaagaagaaggcagagacagattttctt
gcaaatgaaattcagaaaaagagagagaaggaaaataaagaaatggaggagcagagatca
aagaatatggacgatggggctgaaaaggtggccaattttgtattggagcctacgtcaatg
aatcgtccagaggacgaggaagaggctgaaaagagtaatggtgttaggggaagaagcagt
gatggacacaagtcaaggagtatgtctcgatcacctcaacgactacgagactccttttca
caagaaagattatctattagcccacgtcgtagggaccatcgtgattcatcctctcctcga
catagatcatctgattcaagaaggtctagatctacttcaaatcgtaaatctctttctcca
gtagtgcatcagttgcggtctccttctcaacatagttcaccatctcctcattgtagatca
ccacatcaactatcttcgtctgggcaacgtcgatcatcgtcacctgcacaacgaaggtca
ccatcacttgataagcataatagatcaccatcaccatctgagcattgcaggtcactatca
ccaattagacacagtcgtttaccttcacctgctcgacatcgtagatcacaatctcctgaa
tggcatcgtagatcaccatctcctgaatggcgtcgtagatcaccatcaccaaaatggagt
tgtaggtcaccgtcaccaagacaacgtcgtaggtctccatctccaagacgacgtcgtagg
tctccatcaccaagacgacatcgtaggtctccatcaccaagacgacgtcgtaggtctcca
tcgccaagacgacgtcgtaggtctccatcaccaagacgacgtcgtaggtctccatcacca
agacggcgtcacaggtctccatcacctgtacgacgccgaaggtcaccaactcctatacga
cgtcgaaggtcaccaactcctgtacgacgtcgatggtcaccatctccaatacgaagtcga
aggtcaccatcgtcgccgcgtcattacaggtcaccatctccacaccgtcgcaaatcacct
tcccttgtgcgtcgtcatagatcgccatctccagcacactaccggagatcgccctcacct
attaaacaccacccatctcgttctccagggcaacgctctatgtcaccttcatcctcacca
atacagaaatttgataggccatcaccacatcctctagaacgtagatctccatcatctcca
gcacgtctcaagagatcaagcctttctcaacatagatccatttcaccatatgatcagaat
tattcatcaaaggagcggggaaaccgatcgcctgtcaaagtaaaatctcccagggtcaga
accagtgatgaaagaagctactcacgccgaggtaaagccaaggaaactgaggctcggact
gtcgaaaataataagggtaggaaaagacacagaagatcagacaggagtgacacttcttcg
gagagaagacacagaagattagacaggcgtgacacttattcggagagaagacacagaaga
tcagacaggcgcgtcacttcttcggaagacagctatgatagtgaattggagaggaaggag
gccaggagaaggaaggaggaggaggaggagaggaggtgttggaaggagaagaagcgacaa
agacgtgaagagcatggacgtaaaaagggaaagcggcgtgctgagaagacgaaagctaag
actctcagtgatgattgctcggacgatggtcgagctgtaagggaagtgtgtcgtccgagt
gatggtgcgtatgaggccgagcagagaaggttagaggtcgagttgaggaataaggcactg
gaagcattcattgcaaggaaagggagaaggcataataaatcttcagaatag
DBGET
integrated database retrieval system
