Cucurbita moschata (crookneck pumpkin): 111464857
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Entry
111464857 CDS
T05248
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111464857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111464857
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111464857
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
U-box type E3
111464857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
zf-RING_UBOX
Neurochondrin
zf-C3HC4_4
HEAT_EZ
zf-Nse
Arm_2
KAP
zf-C3HC4_2
zf-C3HC4
Mus7
zf-NOSIP
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
111464857
NCBI-ProteinID:
XP_022964880
UniProt:
A0A6J1HM28
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEEENGALIQSLIDVVNEIAWISDFRHTVKKQYCNLSRRLKLLIPMFEEIRDSKEPVPED
TLKALVLLKEALESAKKLLRFGSEGSKIFLAIEREQIMNKFHEVTARLEQALEGIAYDKL
DISDEVKEQVELVLAQFRRAKGRADVPDSELLDDISALYNTSNDSSIDQDRLRRLSEKLQ
LLGISDLAQESIALDEMVTATDGDPGQSIEKMAGLLKKIKDFVQTENLEMDDPGTEKNSP
ASCSGQISNEKNNKAPIIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLESGHGTCP
KTQQKLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPTSARPCRSSSSCSPAERTKIDILL
CKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRVQEHAVTAL
LNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVRIGASGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGTGMVDEAL
AILAILASHSEGKAAIGSAKAVPVLVNVIGTGSPRNRENAAAVLVHLCSGDEQHLVEARD
LGVISSLIDLARSGTDRGKRKAAQLLERMNRLFEHAAHPEEIRVLRLQAPESRPQNQASQ
STSTTEVVGS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaaacggcgctctgattcagagcctgattgatgtagtgaatgagattgct
tggatctcggattttaggcatactgtcaagaagcagtactgcaatttgtccaggagattg
aagcttttgatcccaatgttcgaagagattagggatagcaaagagccagtccccgaggat
actctcaaggctctcgtattgttgaaagaagctctcgaatcggctaagaagttgctcaga
tttggaagcgaggggagcaagattttcctggccatagagagggagcaaattatgaacaaa
tttcatgaggtaaccgctcggttggaacaagctttggaaggaatagcctacgataaactt
gatatatccgatgaagttaaagagcaggtcgagcttgttcttgctcagttcagaagagcc
aaaggcagggccgatgttccggactctgagttattggatgatatctctgccctttataac
acgagcaatgattcttctatagatcaagatcggctgaggagactgtccgaaaaattacag
ttattaggaatatccgatcttgcacaagagtcaatagctttggatgagatggttactgct
actgatggagatccaggtcaaagcattgagaagatggcagggctgctgaagaaaataaaa
gatttcgtgcaaacggagaaccttgaaatggacgatcctggtacagaaaagaattctcca
gcaagttgtagtggacaaatatccaatgagaaaaataacaaggccccaattataccagat
gattttcgctgccccatatccctggagttgatgagagatcctgtcattgtctcaactgga
cagacctatgaacgttcctgcattgagaagtggcttgaatccgggcatgggacgtgtccg
aagacacaacagaaactttcaagcactactcttacaccaaattatgtgttgcgtagcctt
atagcccagtggtgcgaggctaatggtatcgaaccaccaaaacgacccactagtgctcga
ccgtgtagaagctcgtcctcttgctcacctgctgaacgcacaaagattgatattcttctt
tgcaaacttgcatctggaaatcctgaagatcaacgatctgcagctggtgagatccgactt
cttgcaaaacggaacgcagacaatcgcgttgctatagctgaggctggtgcaatacctctc
cttgtcggccttctttcaactcccgactcccgtgttcaagagcatgctgtgacagcactt
cttaacctctctatatgtgaggacaacaagggaagcatcatttcctctggggcagttcct
ggtattgttctcgttctcaagaaggggagcatggaagctcgggagaatgctgcagccact
cttttcagcctttcagtggtggatgaaaataaagttcgaatcggtgcctccggagctatc
ccgccgctcgtcacgctgctcagtgaaggcacacaaagaggtaagaaagatgctgcaact
gctcttttcaacttgtgcatctaccaaggaaacaagggaaaggcagtaagagctggcgtt
gttccaaccttgatgcagcttctcactgaacctggaacaggaatggtggatgaagcctta
gccatcttagcaatactcgccagccattccgaagggaaagctgccatcggatctgcaaag
gcggtaccggttttggtcaatgttatcggtacaggatcaccgaggaacagagagaatgca
gctgcagttctcgtgcacctttgctcaggagacgagcaacacctagtagaggccagagat
cttggagtgataagttcattgatagatttggcacgcagtggcactgacagaggaaagcga
aaagctgctcagttgcttgagcgaatgaaccgactcttcgagcacgcagcgcacccggag
gagattcgagtgcttcggttgcaagcaccggagtctcgacctcaaaaccaggcatcacaa
tcaacctcgaccacggaagtcgtcggtagctga
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