KEGG   Cucurbita moschata (crookneck pumpkin): 111464953
Entry
111464953         CDS       T05248                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111464953
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    111464953
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 DEAD ResIII RING_XB3-XBAT31 Prok-RING_4 zf-C3HC4_4 zf-RING_5 zf-RING_4 UBA_Rad5 zf-ANAPC11 SWI2_SNF2
Other DBs
NCBI-GeneID: 111464953
NCBI-ProteinID: XP_022965011
UniProt: A0A6J1HML1
LinkDB
Position
Unknown
AA seq 1037 aa
MGSKINDELVSTVRSIVGTDFSYMDVIRALHLAKNDVTAAINIIYDTPNFGTRDKSHVHE
NCDDVHVRCVSSSESKAVASTPKRVCDEGADFPSHEEESSTRSPCNVGVKNAIMETSSPC
SSSIGSEWWFVGWAEVAGLSTSKGRKVKPGDEVVFTFPSRNGCKTPSSAKLSGKGKLMAN
CSEIVRFSTKDSGEIGRIPNEWARCLLPLVSDKKVRIEGWCKSAPEVLALMDTILLSVSV
YINSSLLRKHQQTSLKAASSAAAESVIHPLPTLFRLLGLTSFKKAEFTPEDLSGRKQLLD
SKVSYSLPSSLARTLKNCSQNDNGTENEESISDIDLENIVGAGNTSELEEMDPPSALLCE
LRPYQKQALHWMIHLEKGKCMDEAATTLHPCWEAYRLLDERELVIYLNAFSGEATTEFPS
TLQIARGGILADAMGLGKTIMTISLLLAHSERGGVSNSQLTCSSVEGDDGSMHQSLNPLK
KAKITGFEKLQKRNTLASGGNLIICPMSLLGQWKAEIEAHVRPGSLSLYVHYGQTRSKDA
RGLAQNDVVITTYGVLASEFSAQNAEEGGLYSVRWFRVVLDEAHTIKSSKSQVSLAATAL
AADCRWCLTGTPIQNNLEDIFSLLRFLRIEPWGNWAWWNKIIQKPFEEGDERGLKLVQSI
LKPIMLRRTKYSKDREGRPILVLPPADVQVMYCELTDAEKDFYEALFKRSKVKFDQFVEQ
GRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGTPNTQVGEGRD
LPSHAYVQKVMEELRSGEHGECPICLEVFEDAVLTPCAHRMCRECLLTSWRSSCSGLCPV
CRKTINRQDLVTAPTENRFQIDIEKNWVESSKVVALMNELETIRLSGSKSILFSQWTAFL
DLLQVPLSRSNIPFLRLDGTLSQQQREKVLKEFSEDNGILVLLMSLKAGGVGINLTAASN
AFVLDPWWNPAVEEQAVMRIHRIGQTKSVKIRRFIVKGTVEERMEAVQARKQRLISGALT
DQEVRSARIEELKMLFT
NT seq 3114 nt   +upstreamnt  +downstreamnt
atggggagcaagatcaatgacgaactcgtatccacagtacggtccatcgttggtaccgac
ttctcctatatggatgttatcagagctctccacttggccaaaaacgacgtcaccgccgcc
attaatataatctatgatacccctaattttggaacgagggataaatcgcatgttcatgag
aattgtgatgatgttcatgttcgttgcgtctcgagttctgagagcaaggctgttgcctct
acgccgaagcgggtttgtgatgaaggcgcagatttcccgtcgcatgaggaggaaagttct
actcggagtccgtgtaatgttggggtcaagaacgccattatggaaacctccagtccgtgt
tcgagttcgattgggagtgagtggtggttcgttggctgggctgaagtggctgggctgtct
acgtctaagggacggaaggtgaagcctggtgacgaagtggtgttcacatttccttcaaga
aatgggtgtaaaacgccttcatcggctaagctttccgggaagggaaagctcatggccaat
tgttcggagatcgtgaggttttctacaaaagattcaggggagattggtcgaatacccaat
gaatgggctcgatgccttcttccattagtgagtgataaaaaggtaaggatagagggttgg
tgtaaatctgctccagaagtgctggccttaatggatacaattcttttatctgtaagtgta
tacattaacagttctttgcttcgtaagcaccagcaaacctctctcaaggcagctagcagt
gcagctgcagagtcagttattcatcctctcccaactttgtttcggcttcttggtttaaca
tctttcaagaaggctgagtttactccagaggacttgagtggaagaaaacaactgttggac
tcaaaggttagttatagtctgccatcctcactagcgcgtaccttgaagaattgttctcaa
aatgataatgggactgaaaatgaagagtctatctcagatatcgatcttgagaatattgtt
ggcgctgggaacacttcagagctggaggaaatggatccacctagtgctctgctatgtgaa
cttcggccctaccaaaagcaggctcttcattggatgatccatctggagaaaggaaagtgc
atggatgaggctgcaacaacccttcatccatgttgggaagcttatcgtctattagacgag
agggagcttgtcatctatttaaatgctttttctggtgaagcaacgacagagttcccaagc
actcttcaaattgccagaggagggattctggctgatgccatgggccttgggaagaccatc
atgaccatatcccttcttcttgcccattcagaaagaggtggagtatccaatagtcagctg
acatgttcctcagttgaaggagatgatggaagtatgcaccaatctttgaatcctttgaag
aaggctaaaattacaggttttgagaagttacagaagaggaacaccttagcaagcggcggc
aatctgattatttgtcccatgtcccttctaggacaatggaaggcagagattgaagctcat
gtgcgacctggatctctgtctctgtatgttcattatgggcaaactagatccaaggatgct
agagggttggcacaaaatgatgttgtaatcactacatatggggttttagcctcggaattt
tctgcacagaatgctgaagaaggtggactttattcagttaggtggttcagagtggttctt
gacgaggctcacactattaagtcctctaaaagccaagtatcccttgctgctactgcatta
gctgctgactgtcgctggtgccttactggtactcctatccagaacaacctggaggatatc
ttcagtcttcttcgatttttgcggattgaaccttggggaaattgggcatggtggaataaa
atcattcaaaaaccatttgaggaaggtgatgagagagggctaaaattggtccaatccatc
ttaaagcctatcatgctgaggaggactaaatatagtaaggatcgagaaggcaggccaatt
ttagttctgcctccagctgatgttcaggtgatgtactgtgaacttacagatgctgaaaaa
gatttctatgaggcactcttcaagagatccaaggtgaaatttgaccaatttgttgagcaa
ggacgtgtccttcacaattatgcatcgatattggagttactcttacgtcttcgccaatgt
tgtgatcatccctttcttgtgatgagtcgaggtgatacccaagaatattctgatctaaat
aagctagcaaagcgttttcttaaaggcactccaaacacacaggtaggagaaggtagagat
ctgccttctcatgcttatgtccaaaaagttatggaagagcttcgcagcggtgaacatgga
gaatgtccaatatgtcttgaagtatttgaagatgcagtcttgacaccatgtgctcaccgt
atgtgccgggaatgccttttgacaagttggagaagctcttgttctggtttgtgtccagtt
tgtaggaaaaccatcaatagacaggatcttgtaaccgctccaactgagaatcgttttcag
attgatattgagaaaaattgggtggaatcatccaaagttgtggctctgatgaatgaactt
gaaactattcgtttgtcagggtcaaagagtattttattcagccagtggactgcctttctt
gatcttttacaagttcctctctcacggagtaatattccttttctccgtttggatgggact
ttaagtcaacagcagagagaaaaagtactaaaagagttttcagaggataatggaattctg
gtgttgttgatgtcacttaaggctggtggagttggaataaatttgacagctgcttcaaat
gccttcgtattggacccgtggtggaatccagcagttgaagaacaagcagttatgcgcatt
catcgcatcgggcaaactaagagtgtgaagataagacgttttatcgtgaagggtactgtg
gaggaaagaatggaggcggtgcaagcaagaaaacagcgattaatttccggtgccttaaca
gatcaagaagttcgaagtgcaagaattgaagaattgaagatgctttttacttga

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