Cucurbita moschata (crookneck pumpkin): CYL42_pgp033 Help Entry CYL42_pgp033      CDS       T05248                                  Symbol rpoA Name (RefSeq) RNA polymerase alpha subunit   KO K03040   DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos03020   RNA polymerase Brite KEGG Orthology (KO) [BR:cmos00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CYL42_pgp033 (rpoA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmos03021]     CYL42_pgp033 (rpoA)    03400 DNA repair and recombination proteins [BR:cmos03400]     CYL42_pgp033 (rpoA) Enzymes [BR:cmos01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CYL42_pgp033 (rpoA) Transcription machinery [BR:cmos03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      CYL42_pgp033 (rpoA) DNA repair and recombination proteins [BR:cmos03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       CYL42_pgp033 (rpoA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 Motif Other DBs NCBI-ProteinID:  YP_009447567 UniProt:  A0A0S2IF96 LinkDB All DBs Position CP AA seq 331 aa AA seqDB search MVREKIRVSTRTLKWKCVESRADSKRLYYGRFILSPLIKGQADTIGIAMRKALLGEIEGT CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQD IILPPSVEIVDNTQHIANLTQPINLCIELKIERNRGYRIQTPNNFQDASYPIDAIFMPVR NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENFHLK NNKQKVTLPLFTFHEKLAKLRKKKKEIALKYIFIDQSELPPRIYNCLKRSNIHTLFDLLN NSPDELMKMKHFRIEDVKHILDILEMEKNFA NT seq 996 nt NT seq  +upstreamnt  +downstreamnt atggttcgagagaaaataagagtatcgactcggacactaaagtggaagtgtgttgaatca agagcagacagtaagcgtctttattatggacgctttattctgtctccacttattaagggg caagcagatactataggcattgcgatgcgaaaagctttgcttggagaaatagagggaaca tgtatcacacgtgcaaaatctgaaaaaatcccacatgaatactctaccatagttggtatt caagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctg tatggaactcgtgatgcgtctatttgtgtcaagggtcctggatgcgtaactgctcaagac atcatcttaccaccttctgtggaaatcgttgataatacacagcatatagctaacctaacg cagccaattaatttgtgtattgaattaaagatcgagaggaatcgcggatatcgtatacaa acgccaaataattttcaagacgcaagttatcctatagacgctatattcatgcctgttcga aatgcgaatcatagtattcattcttatgtaaatgggaatgaaaaacaagagatacttttt ctcgaaatatggaccaatggaagtttaactcctaaagaagcacttcatgaagcctctcgg aatttgattgatttatttattccttttttacatgcggaagaagaaaacttccatttaaaa aacaataaacagaaagttactttacccctttttacttttcatgagaaattggctaaacta aggaaaaagaaaaaagaaatagcattaaaatatatttttattgaccaatcagaattgcct cctaggatctataattgcctcaaaaggtccaatatacatacattatttgaccttttgaat aatagtccagacgaacttatgaaaatgaaacattttcgcatagaagacgtaaaacatata ttagacattctcgaaatggaaaagaattttgcataa

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