Chamaesiphon minutus: Cha6605_0704
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Entry
Cha6605_0704 CDS
T02414
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp03420
Nucleotide excision repair
cmp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cha6605_0704
03430 Mismatch repair
Cha6605_0704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmp03400
]
Cha6605_0704
Enzymes [BR:
cmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cha6605_0704
DNA repair and recombination proteins [BR:
cmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cha6605_0704
MMR (mismatch excision repair)
Other MMR factors
Cha6605_0704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
DUF2948
DEAD
AAA_30
Ribosomal_L30
DUF5956
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFY91976
UniProt:
K9UC15
LinkDB
All DBs
Position
complement(756065..758446)
Genome browser
AA seq
793 aa
AA seq
DB search
MLAATDLDNLTSDRDRIIAQWRQGLRLGQRTLADWHSGPLAVSAVPGAGKSHSMAVAAAI
TIAREKLHQRRQLIIVTLTRSAAANIKDKIKNCLQELGLPPIGYSVNTIHSLALSIASKH
PELSKLDLTDRTLVMPSANHKLIEDTVQSWLSQNPHSYRCLLEGEGFDGEETERLRRQSV
LRTEVLPSLAFTAVREAKSSGLSPADLWEVAKLYPVGVAPRNEDRYDILSIGAGLYQAYQ
ELLDSQGYLDYDEMIAGALRVMQDPTARRLWQQQVFAVFEDEAQDSSPLQEKLLRHLAEL
PDRHPSEPDVRYEHRLNLIRVGDPNQAINSTFTPADPKYFREFCHECSQIGDLGSPRLEK
MEQAGRSTQIIMDAANFVLDWGNKFLQPPTLSPERVTHDTAETESVFWLQTIRPVSPGDA
QPNPTAQDGGVEFHTPSDVYESVRSIEQRLTTLFKANPTANAAILVRENRQAKFIFDRLA
DWKRLHPEIKLFEAGEGDRTSKIPGELLVLFQFITRPHSSDYLKATLKVLLERKLIDAQD
LDALAVFPERFLYPSILEIPQSPTVRRAREICCELLRSRLTLPHYQLISYLADRLNYQSS
ELATADKLADRIAMQTYGRGSIYSTIEVLQEIVTTEGFENIDDGSESRYTASGQVTIITM
HKAKGLDWDYVFIPFLSDKIPGQLWTPQGAKFLGDFTLAEVARAKIRAHLHHQSLPTPRD
AWELANYLKQGEDLRLLYVAITRAKKLLWLASEQQAPFLWNRFNWQQGDRLQDSKPSPLF
SALCKKFPQLVRQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagctaccgatttagataatctgaccagcgatcgagatcgcatcatcgctcag
tggcggcaaggattgcgcctgggtcaacgaaccctggccgattggcattctggcccctta
gcagtctccgcagtcccaggggcgggaaaatcccatagtatggctgtagctgcggcaata
acaattgcccgcgaaaaattgcaccaacggcgtcagttgataatcgtgaccctaacccga
tcggcagccgcaaatattaaagataaaatcaagaattgtctccaagaattggggctaccg
ccgatcggatatagcgttaataccattcacagcttggcattgagcattgccagcaagcat
cccgaattatctaagctcgatttgaccgatcgtacgttggtgatgccctcagccaaccac
aaactaatcgaggataccgttcaaagctggctgagtcagaaccctcacagttatcgctgt
ttgctcgaaggagaaggcttcgatggggaggagacagaacgcctgcgccgtcagtcggta
ttgcggacagaagtactacccagcttggcattcaccgctgtccgcgaagccaaaagttcg
ggtttgtcacccgccgatctgtgggaagttgccaaattgtatcccgttggcgtagcccct
cggaacgaggatcgttatgacattttgagtatcggagctggactctatcaggcttatcag
gagttgctagacagtcaaggatatctcgactatgacgagatgattgctggggctttgcgg
gtaatgcaagaccccactgcgcgcagattgtggcagcaacaagtttttgctgtatttgaa
gatgaagcacaagactctagtcccctccaagaaaagctactacgccatttggccgaactt
cccgatcgccatccctccgagccggatgttcgctacgaacatcgactcaatctgattcgc
gtcggcgatcccaatcaagcgattaattccacctttacccctgccgatcccaaatatttt
cgggaattttgccacgaatgcagtcagattggcgatcttggctcgccgcgactggaaaaa
atggagcaagccggacgtagtacccaaataattatggatgctgccaactttgtcctcgat
tggggaaataaatttctccaaccgccaacgctatcgccagagcgagtcacccacgacaca
gccgagacagaatcagtcttctggctgcaaacgatccgtcccgtatcgcctggagacgcc
caaccaaatccgacagctcaagatggtggggtagaatttcatacacccagcgatgtctac
gaatccgttcgctcgatcgagcagcgattgacaactttatttaaagccaatccgacggca
aatgcagccattttagtccgcgaaaatcgccaagcaaagttcatctttgacaggctggct
gattggaaacgcctgcatcccgaaatcaaactttttgaagcaggcgaaggcgatcgcacg
tctaaaattccaggagaattactggtcttatttcaatttatcacacgcccgcattctagc
gattatctcaaagccacgctcaaagttttattagaacggaaattaattgacgcccaagat
cttgatgccctagccgtatttcccgaacgttttctctatccgagtatcttagaaatcccg
cagtcgccaacagtccgccgcgcgcgcgaaatctgctgcgaattattgcgatcgagattg
actttaccccattatcaactgattagttatttagccgatcgattgaattaccagtctagc
gaactagcgacagccgataaattagccgatcgaattgcaatgcaaacttacgggcgcggt
tcgatttattccacgatcgaagtcttgcaagaaatcgtcacgactgaaggttttgaaaat
atcgatgatggttctgaatctcgctacaccgcatcaggacaagtgacgattattaccatg
cacaaagccaaaggattggactgggattatgtctttatcccctttttaagtgacaaaata
cccggacaattatggacgccgcaaggtgccaaattcttaggcgactttaccttagcagaa
gtcgcccgtgccaaaattcgcgcccatctccatcatcaatctttaccgacacctagagat
gcatgggagctagctaattatctcaaacaaggagaagacttgcggttattgtatgtagcg
attaccagagctaaaaaactattatggttggcatccgagcagcaagccccatttttgtgg
aatcgctttaattggcagcaaggcgatcgcttacaagatagtaaaccatcacctttgttt
tcggctttatgtaaaaagtttcctcagttagtgaggcagtaa
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