Chamaesiphon minutus: Cha6605_0729
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Entry
Cha6605_0729 CDS
T02414
Name
(GenBank) spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cmp
Chamaesiphon minutus
Pathway
cmp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cha6605_0729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmp02000
]
Cha6605_0729
Transporters [BR:
cmp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Cha6605_0729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AFY92000
UniProt:
K9UAX5
LinkDB
All DBs
Position
complement(787947..789158)
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AA seq
403 aa
AA seq
DB search
MHRRSFLVTLGSLALGSGLTSCQNGNHSVLRLLALKNSLPQQLVNEFNKSIESTNASVEF
VLETQFKDILTQLQEWYNSGAAEAKGLKIPLVPPAQGAEYIPNLTSLGDAWLSRAIEQKL
IQPIDTNNLTNWRKLDSRWRELAQRDERGNSSSTGQIWGVPYRWGTTVIIYRRDKLTEAN
IPLPQDWADLWNPQLRQRISLLDRSREVIGLTLKKLGYSYNAADLDRVLNLQTELAKLHQ
QVKFYSADHYLQPLVIGDTWVAVGWSLDASELIQKNPQIGAVVPRSGTAISADLWVQPSL
SPKLSPANRALLSNSNRLKLSNKWIDHCLQPQSSNQISVLTPGAAPLLTNLNPNDIPPDV
RKNLLTLPSKEVLDKSEFIYPVSPTTKAQFDRLWQETRQKVIS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtagatcctttttagtcacccttggtagtttggctctgggaagtggcttaact
agttgtcaaaatggcaatcattctgtgttgcggttgttagcactcaaaaactctctgcca
cagcaattagttaatgagtttaataagtcgatcgaatcgactaatgctagcgtagaattt
gtgttagagactcaatttaaagatatcctcactcagcttcaagagtggtataacagtggc
gcagccgaagcgaagggattgaagatcccgctagtaccgccagctcaaggtgctgaatat
attcccaatctgacaagcctcggtgatgcctggttatcgagggcaatcgagcagaaatta
attcaaccgatcgacaccaacaatctgaccaattggcgtaaattagattcgcgctggcgg
gaattagcccagcgggacgagcgcggtaattctagttctaccggacaaatttggggcgtt
ccctatcgctggggaacgacggtaattatctatcgccgcgataagttaaccgaagccaat
attccgctccctcaagattgggcagacctgtggaatccccaactgagacagcgaatttcg
ctcttagatcgatcgcgtgaagtcatcggtttgaccttgaaaaagttaggctactcttac
aatgctgccgatctcgatcgcgtcctcaatctccaaacagaactcgccaaactccatcag
caagtaaaattttatagtgccgaccattatctccaaccgctagttatcggcgatacttgg
gtagccgtcggctggtcgttagatgcgagcgaactgattcaaaagaatccccagattggc
gcggtcgtgccgcgttctggtaccgctatttctgccgatctctgggtacaaccatccctc
tcgccgaagttatcgccagccaatcgagcgttacttagcaatagcaatcgactaaaatta
tcgaataagtggatcgaccattgtttgcagccacaatcgagcaaccaaatctctgtcttg
acacccggtgctgctccgttactcacgaatctcaatcccaacgatattccgcccgatgtt
cgcaaaaacttattaactttaccgtcgaaagaagttctagataaaagcgaatttatttac
ccagtatctccaacaaccaaagctcagttcgatcgactctggcaagaaactcgtcaaaaa
gtaattagctag
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